RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 CrnnD3YUU6 520 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 SagP20443 403 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Man2a1P27046 1150 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 FaslgP41047 279 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 AdslP54822 484 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Dsc2P55292 902 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Klhl8P59280 629 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Csn1s2aQ02862 184 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kcna7Q17ST2 489 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ttyh2Q3TH73 532 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Znf629Q6A085 867 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 D11Wsu47eQ6PIX9 558 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr1344Q7TQV3 321 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr1036Q7TR85 310 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 MtdhQ80WJ7 579 aaKnown RBP6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Map4k5Q8BPM2 847 aaKnown RBP6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 H2afy2Q8CCK0 372 aaKnown RBP6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Polr1eQ8K202 482 aaKnown RBP6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Abhd17aQ99JW1 310 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Reg4Q9D8G5 157 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mfsd2aQ9DA75 534 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Insm2Q9JMC2 493 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Oc90Q9Z0L3 485 aa6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sptbn1Q62261 2363 aaKnown RBP6.54□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vmn1r2A2AMT6 306 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pgm2A2CEK3 580 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vmn2r114E9Q281 856 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm5796E9Q7M8 205 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vmn1r170K7N6W9 304 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm3629K7N6Y2 205 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm10340K7N708 205 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Stxbp1O08599 594 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Azin1O35484 448 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 LtfP08071 707 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 FahP35505 419 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ube2e3P52483 207 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ctps2P70303 586 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mex3dQ3UE17 643 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ipcef1Q5DU31 406 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 PigaQ64323 485 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Magee1Q6PCZ4 918 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Myl12aQ6ZWQ9 172 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Adamtsl2Q7TSK7 957 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Poglut1Q8BYB9 392 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Guf1Q8C3X4 651 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Aqp12Q8CHJ2 290 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc45a3Q8K0H7 553 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr1391Q8VFA4 311 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Dhrs1Q99L04 313 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Nkiras2Q9CR56 191 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Eral1Q9CZU4 437 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Paqr5Q9DCU0 330 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pkmyt1Q9ESG9 490 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fgf21Q9JJN1 210 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc22a4Q9Z306 553 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 MgamB5THE2 1827 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm14692A2BH01 229 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mgl2A9XX86 381 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ptrhd1D3Z4S3 140 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm6811E9Q3Y8 510 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm6502L7N456 481 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ackr2O08707 378 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Atn1O35126 1175 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Psmb10O35955 273 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sh3pxd2aO89032 1124 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 CtskP55097 329 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Six5P70178 719 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tmem64Q3U145 381 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ankrd37Q569N2 159 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Xrcc1Q60596 631 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sort1Q6PHU5 825 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Prss54Q7M756 383 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Adgrg7Q8BM96 785 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Prkaa2Q8BRK8 552 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cxcl16Q8BSU2 246 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Grsf1Q8C5Q4 479 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lrp11Q8CB67 483 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kdelr3Q8R1L4 214 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Elf5Q8VDK3 253 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sorcs3Q8VI51 1219 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Chmp1aQ921W0 196 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Clic3Q9D7P7 237 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cyhr1Q9QXA1 311 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ing1Q9QXV3 279 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sec14l5B2RXM5 696 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mkrn2osD3Z393 217 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 PiggD3Z3Y1 983 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc9a3G3X939 829 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm21833J3QPK1 500 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm6401L7N2C0 213 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Clk4O35493 481 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Best1O88870 551 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P01673 111 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Apoa4P06728 395 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Il1r2P27931 410 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gli1P47806 1111 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gng2P63213 71 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q3UTZ3 580 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zmat1Q3V0C1 714 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr381Q5SSP0 311 aa6.53□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms