RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 HIST2H2AA3Q6FI13 130 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ASTLQ6HA08 431 aaPredicted RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 TM9SF2Q99805 663 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ZSCAN5AQ9BUG6 496 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 NIPAL2Q9H841 368 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 RBFOX1Q9NWB1 397 aaKnown RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 A4GNTQ9UNA3 340 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 GPSM3Q9Y4H4 160 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ANKDD1BA6NHY2 528 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PITPNM1O00562 1244 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PROM1O43490 865 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 NME6O75414 186 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PDE9AO76083 593 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 C1QBP02746 253 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 CKMP06732 381 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC2A2P11168 524 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PSKH1P11801 424 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 EPHB3P54753 998 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PPP3R1P63098 170 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 EFNB1P98172 346 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PODNL1Q6PEZ8 512 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 CNIH2Q6PI25 160 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 DUSP18Q8NEJ0 188 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 B3GAT2Q9NPZ5 323 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 TOR4AQ9NXH8 423 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 COMMD3Q9UBI1 195 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC25A13Q9UJS0 675 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 INSL5Q9Y5Q6 135 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC30A4O14863 429 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 B4GALT2O60909 372 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 APOL3O95236 402 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 MYL12AP19105 171 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 MMP11P24347 488 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 MAPK9P45984 424 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 FABP5Q01469 135 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 CAP1Q01518 475 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 PIN1Q13526 163 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 NXPE4Q6UWF7 544 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 COMTD1Q86VU5 262 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 Q8N402 240 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC43A3Q8NBI5 491 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 FBXO15Q8NCQ5 510 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC5A11Q8WWX8 675 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 GATAD2BQ8WXI9 593 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 SNAPC3Q92966 411 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 MED30Q96HR3 178 aa18.54■□□□□ 0.56
PDLIM3-212ENST00000620787 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM129A0AVI4 362 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 ANHXE9PGG2 379 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 CACNB4O00305 520 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 NR2F6P10588 404 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 P2RY14Q15391 338 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF658BQ4V348 819 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TRIQKQ629K1 86 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 BRAT1Q6PJG6 821 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM220Q6QAJ8 160 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 CD300LDQ6UXZ3 194 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 C19orf18Q8NEA5 215 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 OR2A12Q8NGT7 310 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 ANGPTL6Q8NI99 470 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM163Q8TC26 289 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 GLYATL1Q969I3 302 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 NECTIN4Q96NY8 510 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 FGF20Q9NP95 211 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 NFKBIL1Q9UBC1 381 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 MALT1Q9UDY8 824 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 SCN5AQ14524 2016 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TRAV19A0A0A6YYK7 116 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 HMGN4O00479 90 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 GIPRP48546 466 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 SMIM11AP58511 58 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 CDK5Q00535 292 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM115Q12893 351 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 CKAP5Q14008 2032 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 KLHL22Q53GT1 634 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 ZER1Q7Z7L7 766 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 LRRC56Q8IYG6 542 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 TP53I13Q8NBR0 393 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 OR4M1Q8NGD0 313 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 HCAR2Q8TDS4 363 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 DEDD2Q8WXF8 326 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 OR5P2Q8WZ92 322 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 UPRTQ96BW1 309 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 GPA33Q99795 319 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 ISYNA1Q9NPH2 558 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 MRPS18AQ9NVS2 196 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 FBXW2Q9UKT8 454 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 PCDHGB7Q9Y5F8 929 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 CLCA3PQ9Y6N3 262 aa18.53■□□□□ 0.56
PDLIM3-212ENST00000620787 GRM6O15303 877 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 ARHGEF9O43307 516 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 AKR7A2O43488 359 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 HPGDSO60760 199 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 FGF9P31371 208 aaPredicted RBP18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 CLDN20P56880 219 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 CEP78Q5JTW2 689 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 MZT2BQ6NZ67 158 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 RFPL4BQ6ZWI9 263 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 ADGRF3Q8IZF5 1079 aa18.52■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM145Q8NBT3 493 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms