RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 TUBA3CQ13748 450 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 RAB6CQ53S08 254 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 GRHL2Q6ISB3 625 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 CBARPQ8N350 705 aaPredicted RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 MSLNLQ96KJ4 702 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 RAB6CQ9H0N0 254 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 FN3KQ9H479 309 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 TUBA8Q9NY65 449 aaPredicted RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 EEDO75530 441 aaKnown RBP19.24■□□□□ 0.67
CTDP1-208ENST00000613122 SLC16A8O95907 504 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 CD6P30203 668 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 GSCP56915 257 aaPredicted RBP19.24■□□□□ 0.67
CTDP1-208ENST00000613122 SF3B4Q15427 424 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■□□ 14.8
CTDP1-208ENST00000613122 C3orf33Q6P1S2 294 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 CREB3L4Q8TEY5 395 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 CCDC120Q96HB5 630 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 TYROBPO43914 113 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 ISG20Q96AZ6 181 aaKnown RBP19.24■□□□□ 0.67
CTDP1-208ENST00000613122 PARPBPQ9NWS1 579 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 PTGDR2Q9Y5Y4 395 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 NAA10P41227 235 aaPredicted RBP19.24■□□□□ 0.67
CTDP1-208ENST00000613122 CLDN8P56748 225 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 HSD11B2P80365 405 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 ZBED5Q49AG3 693 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 SLC15A3Q8IY34 581 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 SLC46A2Q9BY10 475 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 EURLQ9NYK6 297 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 ANHXE9PGG2 379 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 ATE1O95260 518 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF806P0C7X5 589 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 PRSS56P0CW18 603 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 NDUFAF5Q5TEU4 345 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 SEC14L4Q9UDX3 406 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 PCDHGA6Q9Y5G7 932 aa19.24■□□□□ 0.67
CTDP1-208ENST00000613122 BAZ2AQ9UIF9 1905 aaKnown RBP19.24■□□□□ 0.67
CTDP1-208ENST00000613122 CDK10Q15131 360 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 SLC25A25Q6KCM7 469 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 DNAAF1Q8NEP3 725 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TMIEQ8NEW7 156 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 OR52B6Q8NGF0 335 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KIR2DS5A0A0G2JLQ3 304 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 A0A0G2JNG1 304 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KIR2DS3K7RE56 304 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 WNT7BP56706 349 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KIR2DS5Q14953 304 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 MAMDC2Q7Z304 686 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TCEAL4Q96EI5 215 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KCNK12Q9HB15 430 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ERCC1P07992 297 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 GCGRP47871 477 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TUBA1BP68363 451 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TUBA4AP68366 448 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ST3GAL4Q11206 333 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TUBA1AQ71U36 451 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TMED4Q7Z7H5 227 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 NANOS1Q8WY41 292 aaKnown RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 TRMT2BQ96GJ1 504 aaKnown RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF317Q96PQ6 595 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 CLSTN3Q9BQT9 956 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KLHL21Q9UJP4 597 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 CLEC4EQ9ULY5 219 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 C4BP0C0L5 1744 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 MAZP56270 477 aaKnown RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 C18orf21Q32NC0 220 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KANK2Q63ZY3 851 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 CYS1Q717R9 158 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 PDZD3Q86UT5 571 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 BOLLQ8N9W6 283 aaKnown RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 KCNN1Q92952 543 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF778Q96MU6 729 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ACTRT3Q9BYD9 372 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 RNF6Q9Y252 685 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 GXYLT2A0PJZ3 443 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 BPNT1O95861 308 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 HTR1EP28566 365 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 HOXC13P31276 330 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 SLC7A9P82251 487 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 POU4F2Q12837 409 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ARHGAP11AQ6P4F7 1023 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 NLGN4YQ8NFZ3 816 aaPredicted RBP19.23■□□□□ 0.67
CTDP1-208ENST00000613122 PROKR1Q8TCW9 393 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 FBXL20Q96IG2 436 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 ALOXE3Q9BYJ1 711 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 PREBQ9HCU5 417 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 MKLN1Q9UL63 735 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 SPO11Q9Y5K1 396 aa19.23■□□□□ 0.67
CTDP1-208ENST00000613122 hCG_1807616A0A1W2PRN6 198 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 RHCEP18577 417 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 KDELR2P33947 212 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 CDH15P55291 814 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 GRIK2Q13002 908 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 COL9A2Q14055 689 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 MPP7Q5T2T1 576 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ACSL6Q9UKU0 697 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 HCFC2Q9Y5Z7 792 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 FCER2P06734 321 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 EMP2P54851 167 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 TRAM1Q15629 374 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 GTF2IRD2BQ6EKJ0 949 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms