RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SAMD14Q8IZD0 417 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 C10orf111Q8N326 155 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CADM2Q8N3J6 435 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZNF513Q8N8E2 541 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC38A5Q8WUX1 472 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 GATAD2BQ8WXI9 593 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 C11orf24Q96F05 449 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 TOX2Q96NM4 488 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 OR4K3Q96R72 315 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CSF3RQ99062 836 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 GABARAPL1Q9H0R8 117 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZBP1Q9H171 429 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 KCNN2Q9H2S1 579 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 STUB1Q9UNE7 303 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 B3GALT2O43825 422 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 IFNGP01579 166 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 HLA-DPB1P04440 258 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CYP17A1P05093 508 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 DRD2P14416 443 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 BMPR1AP36894 532 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 MASP1P48740 699 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 RAB25P57735 213 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TAS2R38P59533 333 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ID2Q02363 134 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZNF155Q12901 538 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZNF234Q14588 700 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CTF1Q16619 201 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SOWAHCQ53LP3 525 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 TCEAL5Q5H9L2 206 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC35F1Q5T1Q4 408 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ASTLQ6HA08 431 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 SHFQ7M4L6 423 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 KLHDC8AQ8IYD2 350 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 PARP16Q8N5Y8 322 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 NUP43Q8NFH3 380 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SUN3Q8TAQ9 357 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZNF566Q969W8 418 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 COQ8BQ96D53 544 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 VMP1Q96GC9 406 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 OR5M11Q96RB7 305 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TRPV5Q9NQA5 729 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SOBPA7XYQ1 873 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 HEPACAM2A8MVW5 462 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 FHP07954 510 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 CD22P20273 847 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 GDI1P31150 447 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 SLC6A11P48066 632 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 RAB28P51157 221 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 CD83Q01151 205 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 RPA4Q13156 261 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 GPM6BQ13491 265 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 DUSP7Q16829 419 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 RNF44Q7L0R7 432 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 NANOGNBQ7Z5D8 188 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 TMEM150AQ86TG1 271 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ADIPOR2Q86V24 386 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 PSD4Q8NDX1 1056 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 GNPDA2Q8TDQ7 276 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 CNOT2Q9NZN8 540 aaKnown RBP8.24□□□□□ -1.09
LIG4-204ENST00000611712 PMF1-BGLAPU3KQ54 211 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 F5P12259 2224 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 SDK1Q7Z5N4 2213 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 K7ESM1 405 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 MID1O15344 667 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 FRS3O43559 492 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 OR5F1O95221 314 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 PRPH2P23942 346 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 MAGEA2P43356 314 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 NKX3-2P78367 333 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 CTBSQ01459 385 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 CSTF1Q05048 431 aaKnown RBP8.24□□□□□ -1.09
LIG4-204ENST00000611712 PCDH1Q08174 1060 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 FAM71E1Q6IPT2 247 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ARL9Q6T311 187 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 DOK4Q8TEW6 326 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ZNF354BQ96LW1 612 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 NELL2Q99435 816 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 SLC7A5P2Q9GIP4 190 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 RACGAP1Q9H0H5 632 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 PELI2Q9HAT8 420 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 NEK6Q9HC98 313 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ZNF222Q9UK12 451 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 GPR34Q9UPC5 381 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 HEBP2Q9Y5Z4 205 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 TRIM64CA6NLI5 447 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 GNB5O14775 395 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 SEMA3DO95025 777 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 TIMP1P01033 207 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 BMP1P13497 986 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
LIG4-204ENST00000611712 EIPR1Q53HC9 387 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 C6orf183Q5T699 404 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 MMP21Q8N119 569 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 LRRC17Q8N6Y2 441 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 OSTF1Q92882 214 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 ARRDC3Q96B67 414 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms