RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GPR18Q14330 331 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 SYT16Q17RD7 645 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 PROX2Q3B8N5 592 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 GPAT3Q53EU6 434 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 TMEM35AQ53FP2 167 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 ZNF425Q6IV72 752 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 TCTN3Q6NUS6 607 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 ZNF605Q86T29 641 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 TTLQ8NG68 377 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 TBC1D15Q8TC07 691 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 APOBEC4Q8WW27 367 aaKnown RBP9.97□□□□□ -0.81
TPM1-210ENST00000558264 RPL3LQ92901 407 aaKnown RBP9.97□□□□□ -0.81
TPM1-210ENST00000558264 HSPBAP1Q96EW2 488 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 SCARF2Q96GP6 870 aaPredicted RBP9.97□□□□□ -0.81
TPM1-210ENST00000558264 ZNF226Q9NYT6 803 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 ENTPD4Q9Y227 616 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 POFUT2Q9Y2G5 429 aa9.97□□□□□ -0.81
TPM1-210ENST00000558264 BCL10O95999 233 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 ANXA8P13928 327 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 DRD2P14416 443 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 RHCEP18577 417 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 BUD31P41223 144 aaPredicted RBP9.96□□□□□ -0.81
TPM1-210ENST00000558264 CTSKP43235 329 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 EMP3P54852 163 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 VBP1P61758 197 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 PPP1CAP62136 330 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 C1orf61Q13536 156 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 DCTN2Q13561 401 aaKnown RBP9.96□□□□□ -0.81
TPM1-210ENST00000558264 PTGES3Q15185 160 aaKnown RBP9.96□□□□□ -0.81
TPM1-210ENST00000558264 ADPRMQ3LIE5 342 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 PRSS41Q7RTY9 318 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 NRROSQ86YC3 692 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 TRIM48Q8IWZ4 208 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 MFSD9Q8NBP5 474 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 SMRP1Q8NCR6 262 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 NDNFQ8TB73 568 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 RAB2BQ8WUD1 216 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 ZG16BQ96DA0 208 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 MSLNLQ96KJ4 702 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 COPS4Q9BT78 406 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 PITHD1Q9GZP4 211 aaPredicted RBP9.96□□□□□ -0.81
TPM1-210ENST00000558264 ACSS1Q9NUB1 689 aaPredicted RBP9.96□□□□□ -0.81
TPM1-210ENST00000558264 IMPAD1Q9NX62 359 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 P2RX2Q9UBL9 471 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 DUSP12Q9UNI6 340 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 HCN4Q9Y3Q4 1203 aa9.96□□□□□ -0.81
TPM1-210ENST00000558264 LOC105369274A0A096LPK9 316 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 LOC102723532A0A0G2JNH3 316 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 J3QRK9 145 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 OR10H3O60404 316 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 DPM1O60762 260 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 TBX19O60806 448 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 LIMS1P48059 325 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 KIAA1024LP59773 190 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 ABATP80404 500 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 SIM1P81133 766 aaPredicted RBP9.96□□□□□ -0.82
TPM1-210ENST00000558264 KCNC4Q03721 635 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 MRM1Q6IN84 353 aaKnown RBP9.96□□□□□ -0.82
TPM1-210ENST00000558264 FRMPD2BQ6IN97 320 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 PAQR7Q86WK9 346 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 OR4N4Q8N0Y3 316 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 SLC22A18ASQ8N1D0 253 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 SLC44A3Q8N4M1 653 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
TPM1-210ENST00000558264 DEFB119Q8N690 84 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 RLN3Q8WXF3 142 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 GAS2L1Q99501 681 aaPredicted RBP9.96□□□□□ -0.82
TPM1-210ENST00000558264 GDF15Q99988 308 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 ROGDIQ9GZN7 287 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 ZNF576Q9H609 170 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 ACOT13Q9NPJ3 140 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 STARD5Q9NSY2 213 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 OR6C2Q9NZP2 312 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 KLF15Q9UIH9 416 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 PSME2Q9UL46 239 aa9.96□□□□□ -0.82
TPM1-210ENST00000558264 MRPS2Q9Y399 296 aaKnown RBP9.96□□□□□ -0.82
TPM1-210ENST00000558264 TMEM247A6NEH6 219 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 STSP08842 583 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 F3P13726 295 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 UGT2B7P16662 529 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 DRD1P21728 446 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 CBLP22681 906 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 CHMP24386 653 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 AHRP35869 848 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 RXRGP48443 463 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 KCNJ5P48544 419 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 NCS1P62166 190 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 HOXC5Q00444 222 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 TUBA3CQ13748 450 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 CTF1Q16619 201 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 COLEC12Q5KU26 742 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 SLC48A1Q6P1K1 146 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 FBXO42Q6P3S6 717 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 ZNF438Q7Z4V0 828 aa9.95□□□□□ -0.82
TPM1-210ENST00000558264 BCDIN3DQ7Z5W3 292 aaKnown RBP9.95□□□□□ -0.82
TPM1-210ENST00000558264 TMEM9Q9P0T7 183 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms