RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 NEIL2Q969S2 332 aa12.03□□□□□ -0.48
SNRPF-203ENST00000551316 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
SNRPF-203ENST00000551316 PKP2Q99959 881 aa12.03□□□□□ -0.48
SNRPF-203ENST00000551316 RNF122Q9H9V4 155 aa12.03□□□□□ -0.48
SNRPF-203ENST00000551316 TREX1Q9NSU2 369 aa12.03□□□□□ -0.48
SNRPF-203ENST00000551316 ANAPC5Q9UJX4 755 aa12.03□□□□□ -0.48
SNRPF-203ENST00000551316 DYNC2H1Q8NCM8 4307 aaKnown RBP12.02□□□□□ -0.48
SNRPF-203ENST00000551316 DPRXA6NFQ7 191 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PJA2O43164 708 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 ERI3O43414 337 aaKnown RBP12.02□□□□□ -0.49
SNRPF-203ENST00000551316 SPOPO43791 374 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 FGF17O60258 216 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PPP3CBP16298 524 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 ADRA1DP25100 572 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 ZFP36P26651 326 aaKnown RBP12.02□□□□□ -0.49
SNRPF-203ENST00000551316 NMBRP28336 390 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 AHRP35869 848 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 STX4Q12846 297 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 CDH17Q12864 832 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 BBS9Q3SYG4 887 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 DNAJC14Q6Y2X3 702 aaPredicted RBP12.02□□□□□ -0.49
SNRPF-203ENST00000551316 ZNF793Q6ZN11 406 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 KATNAL2Q8IYT4 538 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 UBQLNLQ8IYU4 475 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PROX1Q92786 737 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 GAL3ST3Q96A11 431 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 MS4A6EQ96DS6 147 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 NUP62CLQ9H1M0 184 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 SYBUQ9NX95 663 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 LCMT1Q9UIC8 334 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 CLEC4AQ9UMR7 237 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 DAPP1Q9UN19 280 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
SNRPF-203ENST00000551316 PSTPIP1O43586 416 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 AQP8O94778 261 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 SNX4O95219 450 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 MPC1LP0DKB6 136 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 ARAFP10398 606 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 HERVK_113P63132 956 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 ERVK-8P63133 956 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 IRF9Q00978 393 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 LGALS3BPQ08380 585 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 GPS1Q13098 491 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 CTBP1Q13363 440 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 DOC2AQ14183 400 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 OR2A2Q6IF42 318 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 ZNF549Q6P9A3 640 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 CES3Q6UWW8 571 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 DND1Q8IYX4 353 aaKnown RBP12.01□□□□□ -0.49
SNRPF-203ENST00000551316 OTUD6BQ8N6M0 293 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 WDSUB1Q8N9V3 476 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 OR1J4Q8NGS1 313 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 PPP1R2P1Q96PQ5 205 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 ERVK-6Q9BXR3 956 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
SNRPF-203ENST00000551316 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
SNRPF-203ENST00000551316 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 ERVK-19Q9WJR5 959 aa12.01□□□□□ -0.49
SNRPF-203ENST00000551316 PABPN1LA6NDY0 278 aaKnown RBP12□□□□□ -0.49
SNRPF-203ENST00000551316 ZBTB14O43829 449 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 ESR1P03372 595 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 SUCLG1P53597 346 aaKnown RBP12□□□□□ -0.49
SNRPF-203ENST00000551316 CDH11P55287 796 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 KIF5AQ12840 1032 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 TAB1Q15750 504 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 CENPUQ71F23 418 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 MPP5Q8N3R9 675 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 CD200R1Q8TD46 325 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 NXNL1Q96CM4 212 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 SNF8Q96H20 258 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 FBXL20Q96IG2 436 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 BTBD9Q96Q07 612 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 NODALQ96S42 347 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 NPLQ9BXD5 320 aaPredicted RBP12□□□□□ -0.49
SNRPF-203ENST00000551316 FBXL2Q9UKC9 423 aa12□□□□□ -0.49
SNRPF-203ENST00000551316 MRPS33Q9Y291 106 aaKnown RBP12□□□□□ -0.49
SNRPF-203ENST00000551316 BZW2Q9Y6E2 419 aaKnown RBP12□□□□□ -0.49
SNRPF-203ENST00000551316 LRP5LA4QPB2 252 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 E5RI56 91 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 LINC01387J3KSC0 135 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 PRKRAO75569 313 aaKnown RBP11.99□□□□□ -0.49
SNRPF-203ENST00000551316 SERPINA6P08185 405 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 NR4A2P43354 598 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 PLA2G16P53816 162 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 SLC37A1P57057 533 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 IGLV3-21P80748 117 aaPredicted RBP11.99□□□□□ -0.49
SNRPF-203ENST00000551316 SPOCK1Q08629 439 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 CCDC181Q5TID7 509 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 TRIM40Q6P9F5 258 aa11.99□□□□□ -0.49
SNRPF-203ENST00000551316 B3GLCTQ6Y288 498 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms