RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 ZFP64Q9NPA5 681 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.441e-5■□□□□ 8.8
CPSF6-204ENST00000547486 SPRR3Q9UBC9 169 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 TRGV5A0A0B4J1U4 118 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 OR6C76A6NM76 312 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 TRIM49D1C9J1S8 452 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 BCKDKO14874 412 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 SMIM24O75264 130 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 SEMA3DO95025 777 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 COL6A2P12110 1019 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 S1PR1P21453 382 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 SERPINB3P29508 390 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 MAN2A2P49641 1150 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 SERPINB9P50453 376 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 XKP51811 444 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 CDH13P55290 713 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 KCNJ2P63252 427 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 TLE4Q04727 773 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 FUT7Q11130 342 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 NTRK2Q16620 822 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 CCNYL2Q5T2Q4 361 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-204ENST00000547486 OR52E8Q6IFG1 317 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 LETMD1Q6P1Q0 360 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ACAD11Q709F0 780 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 MILR1Q7Z6M3 343 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 LIX1LQ8IVB5 337 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 MMP21Q8N119 569 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 LRRC25Q8N386 305 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-204ENST00000547486 METTL4Q8N3J2 472 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF615Q8N8J6 731 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 OR4K14Q8NGD5 310 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ADIPOR1Q96A54 375 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 FMO2Q99518 471 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 LDAHQ9H6V9 325 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF703Q9H7S9 590 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-204ENST00000547486 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 CNIH4Q9P003 139 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF180Q9UJW8 692 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF225Q9UK10 706 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ADAM29Q9UKF5 820 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ACAD8Q9UKU7 415 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 CES1P1Q9UKY3 287 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 TMCO1Q9UM00 188 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 IKBKGQ9Y6K9 419 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.45
CPSF6-204ENST00000547486 A0A0G2JNJ9 132 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 HCN1O60741 890 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 KRT38O76015 456 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 PDYNP01213 254 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 RPS17P08708 135 aaKnown RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 PIK3R1P27986 724 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 GCAP28676 217 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 SOX18P35713 384 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 ADH7P40394 386 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 FBXW4P57775 412 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 MGAT2Q10469 447 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 GALNT1Q10472 559 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 TBL3Q12788 808 aaKnown RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 GGTA1PQ4G0N0 100 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 BICRALQ6AI39 1079 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 OR10Q1Q8NGQ4 319 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF483Q8TF39 744 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 TP53INP1Q96A56 240 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 JSRP1Q96MG2 331 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 MRPL57Q9BQC6 102 aaKnown RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 TSPYL1Q9H0U9 437 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 OR10A5Q9H207 317 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 SLC6A15Q9H2J7 730 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
CPSF6-204ENST00000547486 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 ALKBH4Q9NXW9 302 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 Q9UFV3 132 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 ITGB1BP2Q9UKP3 347 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 EML6Q6ZMW3 1958 aa12.26□□□□□ -0.45
CPSF6-204ENST00000547486 CACNA1CQ13936 2221 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 FIGNL2A6NMB9 653 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 A8MT66 165 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 TRIM3O75382 744 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-204ENST00000547486 CPMP14384 443 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 NT5EP21589 574 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 CNTFP26441 200 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 MSX1P28360 303 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 HSD17B3P37058 310 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 IFT88Q13099 833 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 DUSP8Q13202 625 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 WLSQ5T9L3 541 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 FNDC7Q5VTL7 733 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 FAM111BQ6SJ93 734 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 B3GNT6Q6ZMB0 384 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 COMMD6Q7Z4G1 85 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 GALNT12Q8IXK2 581 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 DMRTC2Q8IXT2 367 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-204ENST00000547486 DND1Q8IYX4 353 aaKnown RBP12.25□□□□□ -0.45
CPSF6-204ENST00000547486 TAGAPQ8N103 731 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 SIMC1Q8NDZ2 872 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms