RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ARHGAP19Q14CB8 494 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TMEM81Q6P7N7 255 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 BRAT1Q6PJG6 821 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 SCIMPQ6UWF3 145 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ENPP6Q6UWR7 440 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 B3GNT8Q7Z7M8 397 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PHYKPLQ8IUZ5 450 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TIGD4Q8IY51 512 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 FBXO39Q8N4B4 442 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 CLDN19Q8N6F1 224 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ATG16L2Q8NAA4 619 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PAPD5Q8NDF8 572 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 DEDD2Q8WXF8 326 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 Q96MT0 163 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TRNT1Q96Q11 434 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 NEU1Q99519 415 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 HTATIP2Q9BUP3 242 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TRIM54Q9BYV2 358 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 CIPCQ9C0C6 399 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TUBB1Q9H4B7 451 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 SFXN1Q9H9B4 322 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 MID1IP1Q9NPA3 183 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 DNAJC11Q9NVH1 559 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 USE1Q9NZ43 259 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 NPAP1Q9NZP6 1156 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 C3orf18Q9UK00 162 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 DNAJC15Q9Y5T4 150 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF780AO75290 641 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 SRPRAP08240 638 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 CHMP24386 653 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ACTR1BP42025 376 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 DGKGP49619 791 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PGDP52209 483 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TEKQ02763 1124 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ADAM15Q13444 863 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ATP13A5Q4VNC0 1218 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PRSS48Q7RTY5 328 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 HDDC2Q7Z4H3 204 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RIMKLAQ8IXN7 391 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 OR10Q1Q8NGQ4 319 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RFKQ969G6 155 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 TEX37Q96LM6 180 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ASB2Q96Q27 587 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 EDEM2Q9BV94 578 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PBX4Q9BYU1 374 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 ACOT13Q9NPJ3 140 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 NUDT15Q9NV35 164 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PCDHB14Q9Y5E9 798 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 SPINT1O43278 529 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 TULP3O75386 442 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 WDPCPO95876 746 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 LIPAP38571 399 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 WNT5AP41221 380 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 RAB4BP61018 213 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 TAP2Q03519 686 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 GLO1Q04760 184 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 PUDPQ08623 228 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 LCP2Q13094 533 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 GBX1Q14549 363 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 BTBD16Q32M84 506 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 SYT6Q5T7P8 510 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF691Q5VV52 312 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 SLC25A24Q6NUK1 477 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 HSD11B1LQ7Z5J1 315 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 TPRA1Q86W33 373 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 PROSER1Q86XN7 944 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 DTWD1Q8N5C7 304 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 ATOH1Q92858 354 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 FGF13Q92913 245 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 CRELD1Q96HD1 420 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 C7orf34Q96L11 122 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 LURAP1Q96LR2 239 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 TRIM2Q9C040 744 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 OPN3Q9H1Y3 402 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 ZFP14Q9HCL3 533 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 ZDHHC3Q9NYG2 299 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 CRLS1Q9UJA2 301 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 PCDHGA9Q9Y5G4 932 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 MYO7AQ13402 2215 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 I3L521 148 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 PLD2O14939 933 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 KLF4O43474 513 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 SLC25A14O95258 325 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 CSF2P04141 144 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 HRGP04196 525 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 KLK3P07288 261 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 NCF1P14598 390 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF30P17039 623 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 PRDX3P30048 256 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 VIPR1P32241 457 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 RYKP34925 604 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 GPX4P36969 197 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 SLC6A11P48066 632 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 DCDC1P59894 354 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 UFM1P61960 85 aa7.6□□□□□ -1.19
PDLIM5-221ENST00000542407 GRIK2Q13002 908 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms