RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LSM14AQ8ND56 463 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 OR5AK3PQ8NH89 298 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF582Q96NG8 517 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 TEFMQ96QE5 360 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 PRR14Q9BWN1 585 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC19A2O60779 497 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 GAAP10253 952 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 DSG2Q14126 1118 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 TYW3Q6IPR3 259 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF280BQ86YH2 543 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 OR11H7Q8NGC8 314 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 OR11H4Q8NGC9 324 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 OR6K2Q8NGY2 324 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 CUEDC1Q9NWM3 386 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF222Q9UK12 451 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 IRGMA1A4Y4 181 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 AKAP8O43823 692 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 KLKB1P03952 638 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF8P17098 575 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 DDCP20711 480 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 DGKGP49619 791 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 GAS1P54826 345 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 RAB40BQ12829 278 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 BAMBIQ13145 260 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 ADNP2Q6IQ32 1131 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 C16orf62Q7Z3J2 963 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 PRSS42Q7Z5A4 293 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 THOC6Q86W42 341 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 SDR16C5Q8N3Y7 309 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 SCMH1Q96GD3 660 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 TM6SF2Q9BZW4 377 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 HDHD2Q9H0R4 259 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 PRM3Q9NNZ6 103 aa17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 FGF20Q9NP95 211 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 MRPS18AQ9NVS2 196 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-207ENST00000538548 GTPBP1O00178 669 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 GPR37L1O60883 481 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 TP53P04637 393 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 H1F0P07305 194 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 RRASP10301 218 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF763Q0D2J5 394 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 MPPE1Q53F39 396 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 REEP3Q6NUK4 255 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 TCTN3Q6NUS6 607 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 C17orf99Q6UX52 265 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 GPR26Q8NDV2 337 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 FBXO22Q8NEZ5 403 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 CLP1Q92989 425 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 CIDECQ96AQ7 238 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 OTULINQ96BN8 352 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 CLEC4MQ9H2X3 399 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 GHITMQ9H3K2 345 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 SEMA3GQ9NS98 782 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 TMEM161AQ9NX61 479 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 STON1Q9Y6Q2 735 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 SH3BP5O60239 455 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 SEMA7AO75326 666 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 NCR1O76036 304 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 ACP2P11117 423 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 CLCNKAP51800 687 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 PTPN5P54829 565 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 RIPPLY1Q0D2K3 151 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 EXOSC2Q13868 293 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 FGFBP1Q14512 234 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 UNC5DQ6UXZ4 953 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 LUZP2Q86TE4 346 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 ADGRG3Q86Y34 549 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 TMEM121BQ9BXQ6 578 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.63■□□□□ 0.411e-7■■■■■ 36
SFSWAP-207ENST00000538548 PPA2Q9H2U2 334 aa17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-207ENST00000538548 A8MX80 341 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 TMEM189-UBE2V1I3L0A0 370 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 SLC9A3R1O14745 358 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 CORO1AP31146 461 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 DSTNP60981 165 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 HSF2Q03933 536 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 BCL2L1Q07817 233 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF783Q6ZMS7 281 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 GPAT4Q86UL3 456 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 ARHGAP9Q9BRR9 750 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 SLCO1C1Q9NYB5 712 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 UBQLN2Q9UHD9 624 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 RNF215Q9Y6U7 377 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 KIAA1671Q9BY89 1806 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 MANSC4A6NHS7 340 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 OPRD1P41143 372 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 CSTF1Q05048 431 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 UBE3AQ05086 875 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 RPA4Q13156 261 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 CD276Q5ZPR3 534 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 GDF6Q6KF10 455 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 ADGRD2Q7Z7M1 963 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 ARIH2OSQ8N7S6 290 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 OR7G3Q8NG95 312 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 NEIL3Q8TAT5 605 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms