RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KIAA0930Q6ICG6 404 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ESRP1Q6NXG1 681 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 PRSS55Q6UWB4 352 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 SVBPQ8N300 66 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 SSX3Q99909 188 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 DLL4Q9NR61 685 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 CILPO75339 1184 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ANXA9O76027 345 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 OR4F21O95013 312 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 DIRAS1O95057 198 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ESR1P03372 595 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 CKMT1AP12532 417 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ITGB7P26010 798 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 EPHA4P54764 986 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 HFEQ30201 348 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 TEX30Q5JUR7 227 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 OR4F3Q6IEY1 312 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 FAHD1Q6P587 224 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ALKAL2Q6UX46 152 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 DEF8Q6ZN54 512 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 BMP8AQ7Z5Y6 402 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 TMEM40Q8WWA1 233 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 RAB7BQ96AH8 199 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 CCM2Q9BSQ5 444 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 YIPF4Q9BSR8 244 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 ZCCHC4Q9H5U6 513 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 CDCP1Q9H5V8 836 aa10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 POLR3HQ9Y535 204 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-207ENST00000537408 STX11O75558 287 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ANXA8P13928 327 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 PAICSP22234 425 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 RAB4BP61018 213 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 DUSP4Q13115 394 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 UBXN2BQ14CS0 331 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF628Q5EBL2 1059 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 C22orf42Q6IC83 251 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 OR52K2Q8NGK3 314 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TMEM163Q8TC26 289 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 CHTF18Q8WVB6 975 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SCMH1Q96GD3 660 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TMEM41AQ96HV5 264 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF599Q96NL3 588 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TAS2R3Q9NYW6 316 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 LOC285095A0A1B0GVY8 99 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SCAMP1O15126 338 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 PRR35P0CG20 571 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 CTPS1P17812 591 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 LILRA4P59901 499 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 MAD2L1Q13257 205 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SPIN4Q56A73 249 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 PIWIL1Q96J94 861 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 LURAP1Q96LR2 239 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TAPBPLQ9BX59 468 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 HHATLQ9HCP6 504 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SERHLQ9NQF3 203 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 KCMF1Q9P0J7 381 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 LOC105369274A0A096LPK9 316 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 GPR171O14626 319 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TO15178 435 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SERPINA3P01011 423 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 HLA-DPA1P20036 260 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SLC6A1P30531 599 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SLC11A2P49281 568 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 AFF1P51825 1210 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 LRRC32Q14392 662 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 EIF2S3LQ2VIR3 472 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 GTDC1Q4AE62 458 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TCTE1Q5JU00 501 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 PRAMEF13Q5VWM6 474 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 OR4N4Q8N0Y3 316 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 GJD3Q8N144 294 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 C1GALT1C1Q96EU7 318 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ZC3H10Q96K80 434 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 NSUN5Q96P11 429 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ACTR6Q9GZN1 396 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 SIPA1L1O43166 1804 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ANKDD1BA6NHY2 528 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 GFRA2O00451 464 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 FFAR3O14843 346 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 GPR42O15529 346 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ALDOBP05062 364 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 FAM157BP0CG42 384 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 RNF224P0DH78 156 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 USP53Q70EK8 1073 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 ISCA2Q86U28 154 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 PDZD3Q86UT5 571 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 MRPL43Q8N983 215 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 NELL2Q99435 816 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 FICDQ9BVA6 458 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 QRSL1Q9H0R6 528 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 KLHL1Q9NR64 748 aa10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-207ENST00000537408 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms