RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CCDC28AQ8IWP9 274 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 SYNPOQ8N3V7 929 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP38-202ENST00000510377 ZNF480Q8WV37 535 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 MACROD1Q9BQ69 325 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 PPIL3Q9H2H8 161 aaKnown RBP14.16□□□□□ -0.14
USP38-202ENST00000510377 GPSM3Q9Y4H4 160 aa14.16□□□□□ -0.14
USP38-202ENST00000510377 TMEM189-UBE2V1I3L0A0 370 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 MEN1O00255 615 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 DSCR3O14972 297 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SRPRAP08240 638 aaKnown RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 HTR3AP46098 478 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 MTNR1AP48039 350 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 ADAM15Q13444 863 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 BCL2L15Q5TBC7 163 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 MTFR2Q6P444 385 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SLC36A4Q6YBV0 504 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 CBARPQ8N350 705 aaPredicted RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 HORMAD2Q8N7B1 307 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SUSD6Q92537 303 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 NARS2Q96I59 477 aaKnown RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 C3orf14Q9HBI5 128 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 MARCH5Q9NX47 278 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 ZNF780BQ9Y6R6 833 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 CSO75390 466 aaKnown RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 KHDRBS3O75525 346 aaKnown RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 C1SP09871 688 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 TGM3Q08188 693 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 KCNC3Q14003 757 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 TPGS2Q68CL5 300 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 FAHD1Q6P587 224 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 RELTQ969Z4 430 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 GABARAPL1Q9H0R8 117 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 TMEM184CQ9NVA4 438 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SLC6A14Q9UN76 642 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 PADI2Q9Y2J8 665 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 H3BSH0 61 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 LYRM1O43325 122 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 ERP29P30040 261 aaKnown RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 ZNF81P51508 661 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 CLCNKAP51800 687 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 CDC20Q12834 499 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SYPL1Q16563 259 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 IL20RBQ6UXL0 311 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 AMZ2Q86W34 360 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 CCDC71Q8IV32 467 aaPredicted RBP14.15□□□□□ -0.14
USP38-202ENST00000510377 SLC30A8Q8IWU4 369 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 OR52P1PQ8NH57 321 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 SMPDL3AQ92484 453 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 IFT27Q9BW83 186 aa14.15□□□□□ -0.14
USP38-202ENST00000510377 TRIM64A6NGJ6 449 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 PCP4L1A6NKN8 68 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 J3QLW9 94 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ALPPP05187 535 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ZNF19P17023 458 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 RPL4P36578 427 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 RPS25P62851 125 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 GPR68Q15743 365 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 XKRXQ6PP77 449 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 GLCCI1Q86VQ1 547 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ZCCHC10Q8TBK6 192 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 APH1BQ8WW43 257 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ECHDC3Q96DC8 303 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 FAM46AQ96IP4 442 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 ASIC5Q9NY37 505 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 CCL27Q9Y4X3 112 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 PCDHGA2Q9Y5H1 932 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 H3BNC9 293 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 IMPA1P29218 277 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 MAGEA2P43356 314 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 PPP3R1P63098 170 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 RPA4Q13156 261 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 UBQLNLQ8IYU4 475 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 CLSTN3Q9BQT9 956 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 KCNN2Q9H2S1 579 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ADAP2Q9NPF8 381 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 CNOT2Q9NZN8 540 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 PRELID1Q9Y255 219 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 DOCK3Q8IZD9 2030 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 LAMP2P13473 410 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ZNF30P17039 623 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 KHKP50053 298 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 WNT4P56705 351 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 EIF4EBP2Q13542 120 aaPredicted RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 ZNF362Q5T0B9 420 aaPredicted RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 METTL2BQ6P1Q9 378 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 FBXO46Q6PJ61 603 aaPredicted RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 NXPE4Q6UWF7 544 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 RNF44Q7L0R7 432 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 GDPD1Q8N9F7 314 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 FAM98AQ8NCA5 519 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 OR5H6Q8NGV6 325 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 C12orf66Q96MD2 445 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 LINC00597Q9H2U6 94 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 NEUROD4Q9HD90 331 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms