RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CDC20BQ86Y33 519 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 LIX1LQ8IVB5 337 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 TEX9Q8N6V9 391 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 MBD6Q96DN6 1003 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 DMRT3Q9NQL9 472 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 TRMT1Q9NXH9 659 aaKnown RBP19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 CAMK2AQ9UQM7 478 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 ACOT9Q9Y305 439 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 SNX24Q9Y343 169 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 EML6Q6ZMW3 1958 aa19.32■□□□□ 0.68
SQSTM1-210ENST00000506042 A0A087X1B8 175 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 TCRBV9S1A1TA0A576 114 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 FAM187AA6NFU0 413 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 PROM1O43490 865 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 ERN1O75460 977 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 FAM58BPP0C7Q3 252 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 NR0B1P51843 470 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 SLC37A1P57057 533 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 GNG11P61952 73 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 DAZAP2Q15038 168 aaPredicted RBP19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 METTL2BQ6P1Q9 378 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 PAGE2Q7Z2X7 111 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 GALNT12Q8IXK2 581 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 RHEBL1Q8TAI7 183 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 NRGNQ92686 78 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 ZFP3Q96NJ6 502 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 MTERF1Q99551 399 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 YIPF4Q9BSR8 244 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 PSD3Q9NYI0 1048 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 PLEKHA6Q9Y2H5 1048 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 NPFFR2Q9Y5X5 522 aa19.31■□□□□ 0.68
SQSTM1-210ENST00000506042 LRRC3CA6NJW4 275 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 CD8B2A6NJW9 211 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 FAM159BA6NKW6 160 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 PLPP1O14494 284 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 ZNF354AO60765 605 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 PRAMEF4O60810 478 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 RFPL3SP0C7P2 107 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 EPXP11678 715 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 ENDOUP21128 410 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 TACR1P25103 407 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 CEACAM8P31997 349 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 PRAMEF9Q5VWM5 478 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 NSUN5P2Q63ZY6 315 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 PAMR1Q6UXH9 720 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 CREG2Q8IUH2 290 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 C17orf47Q8NEP4 570 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 ATP6V1E2Q96A05 226 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 RILPQ96NA2 401 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 SERPINI1Q99574 410 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 ZNF358Q9NW07 568 aa19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 CNOT11Q9UKZ1 510 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 UTP11Q9Y3A2 253 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-210ENST00000506042 GOLGA6L10A6NI86 522 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 FAM171A2A8MVW0 826 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 EEF1E1-BLOC1S5C9J1V9 151 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 H0YIV9 168 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 EEF1E1O43324 174 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 IL18BPO95998 194 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ACTL6AO96019 429 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 HPNP05981 417 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 CYP4B1P13584 511 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 CTSSP25774 331 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 CDK9P50750 372 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ALDH18A1P54886 795 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 CRYZQ08257 329 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 C18orf63Q68DL7 685 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ENPP6Q6UWR7 440 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ISCA2Q86U28 154 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 PPM1NQ8N819 430 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 OR7G1Q8NGA0 311 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 TRIB1Q96RU8 372 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 TIMP4Q99727 224 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 SH3GL2Q99962 352 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ERP44Q9BS26 406 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 PRDM14Q9GZV8 571 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 DDX31Q9H8H2 851 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 METTL7AQ9H8H3 244 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 CALHM2Q9HA72 323 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 NEUROD4Q9HD90 331 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 C15orf41Q9Y2V0 281 aa19.29■□□□□ 0.68
SQSTM1-210ENST00000506042 UBXN8O00124 270 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 CASKO14936 926 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 TRIM3O75382 744 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 SEMA3DO95025 777 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 NAGAP17050 411 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 EPORP19235 508 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 HNRNPH2P55795 449 aaKnown RBP19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 RPS13P62277 151 aaKnown RBP19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 TTC19Q6DKK2 380 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 ADGRD1Q6QNK2 874 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 LYPD8Q6UX82 237 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 BIVMQ86UB2 503 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 RELL2Q8NC24 303 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 TNIP2Q8NFZ5 429 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 OR4K14Q8NGD5 310 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 OR1J4Q8NGS1 313 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 SPPL2AQ8TCT8 520 aa19.28■□□□□ 0.68
SQSTM1-210ENST00000506042 TMEM41AQ96HV5 264 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms