RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 C19orf43Q9BQ61 176 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FDXACB1Q9BRP7 624 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FUZQ9BT04 418 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 POLDIP3Q9BY77 421 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TINAGL1Q9GZM7 467 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF334Q9HCZ1 680 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SEMA4BQ9NPR2 832 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 C1GALT1Q9NS00 363 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 IMPAD1Q9NX62 359 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TAS2R16Q9NYV7 291 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MED11Q9P086 117 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF70Q9UC06 446 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF222Q9UK12 451 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 EXOSC1Q9Y3B2 195 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CASKO14936 926 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SUSD5O60279 629 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RP2O75695 350 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 JCHAINP01591 159 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RLN2P04090 185 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 UBBP0CG47 229 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 UBCP0CG48 685 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 HSMCR30P0CW71 290 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NFYAP23511 347 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MST1P26927 711 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MPGP29372 298 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CCND3P30281 292 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 THBS2P35442 1172 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CASP2P42575 452 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RGS4P49798 205 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RPS27AP62979 156 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 UBA52P62987 128 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SELENOWP63302 87 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TAP2Q03519 686 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 YWHAHQ04917 246 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RBBP4Q09028 425 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CDH18Q13634 790 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 KLF9Q13886 244 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 KRT33BQ14525 404 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZBTB6Q15916 424 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 AMHR2Q16671 573 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 DUOXA1Q1HG43 343 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RAB41Q5JT25 222 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 AVPI1Q5T686 147 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 HBMQ6B0K9 141 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ALG1LQ6GMV1 187 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 KIAA1161Q6NSJ0 714 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MRNIPQ6NTE8 343 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SLC27A1Q6PCB7 646 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 LINGO4Q6UY18 593 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 C17orf107Q6ZR85 190 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SLC9B2Q86UD5 537 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PIM3Q86V86 326 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SVBPQ8N300 66 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 KLHL36Q8N4N3 616 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OR8J2Q8NGG1 315 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OR8J1Q8NGP2 316 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SH3RF2Q8TEC5 729 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CNOT9Q92600 299 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NELL1Q92832 810 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PNPLA2Q96AD5 504 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OR52E6Q96RD3 313 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ARHGAP9Q9BRR9 750 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NLNQ9BYT8 704 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZDHHC5Q9C0B5 715 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PIGMQ9H3S5 423 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OSGEPL1Q9H4B0 414 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NRBP2Q9NSY0 501 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF219Q9P2Y4 722 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MGAT4CQ9UBM8 478 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 AGAP14A8MT82 685 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SUPT3HB4E1H0 165 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF593O00488 134 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NBNO60934 754 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 POMCP01189 267 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SLC10A3P09131 477 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 POU1F1P28069 291 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PTPN5P54829 565 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SPCS3P61009 180 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 LAMTOR4Q0VGL1 99 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SWI5Q1ZZU3 235 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ATPAF1Q5TC12 328 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FKBP1CQ5VVH2 108 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF660Q6AZW8 331 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TPRA1Q86W33 373 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SLC30A8Q8IWU4 369 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OR6V1Q8N148 313 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 L3MBTL4Q8NA19 623 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OR52K2Q8NGK3 314 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PCYT2Q99447 389 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 POLR2J2Q9GZM3 115 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM184CQ9NVA4 438 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FAM120CQ9NX05 1096 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 AKAP7Q9P0M2 348 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FBXL2Q9UKC9 423 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SLC6A14Q9UN76 642 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SNX11Q9Y5W9 270 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 C1orf226A1L170 272 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ARVCFO00192 962 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 B4GALT5O43286 388 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms