RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 GFM1Q96RP9 751 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MNTQ99583 582 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TBL1YQ9BQ87 522 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 H2AFJQ9BTM1 129 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CNPPD1Q9BV87 410 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MND1Q9BWT6 205 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MAGEB5Q9BZ81 275 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC29A3Q9BZD2 475 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 NXF3Q9H4D5 531 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C8orf33Q9H7E9 229 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FZD3Q9NPG1 666 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 DLL4Q9NR61 685 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GSN-AS1Q9NRJ2 163 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 THUMPD1Q9NXG2 353 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ASIC5Q9NY37 505 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 HCN3Q9P1Z3 774 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 DERAQ9Y315 318 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC6A5Q9Y345 797 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SBF1O95248 1867 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 PDCD11Q14690 1871 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 GBF1Q92538 1859 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 LOC102723532A0A0G2JNH3 316 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 RRN3P2A6NIE6 340 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 WRBO00258 174 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 WWP2O00308 870 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC28A1O00337 649 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MAN2B1O00754 1011 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 PDCD5O14737 125 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 PER2O15055 1255 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NUPL2O15504 423 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 AKAP8O43823 692 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCN2BO60939 215 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NDUFS6O75380 124 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SOX30O94993 753 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 DHFRP00374 187 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 FCER2P06734 321 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 HBQ1P09105 142 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 HSMCR30P0CW71 290 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 DNASE1P24855 282 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 APEX1P27695 318 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 BTCP35070 178 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MMP12P39900 470 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 STARP49675 285 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 STK19P49842 368 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 COL4A4P53420 1690 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CDKN2DP55273 166 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 IL2P60568 153 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 VLDLRP98155 873 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 DUSP4Q13115 394 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 HNRNPA0Q13151 305 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 GTF2H3Q13889 308 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CAPSQ13938 189 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 PGM5Q15124 567 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MED22Q15528 200 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR4D1Q15615 310 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SNAPC1Q16533 368 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 AP5B1Q2VPB7 878 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF284Q2VY69 593 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC25A52Q3SY17 297 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF789Q5FWF6 425 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 TEX30Q5JUR7 227 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CDKL4Q5MAI5 379 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 KIAA1217Q5T5P2 1943 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MEDAGQ5VYS4 303 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CNIH2Q6PI25 160 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 BHLHB9Q6PI77 547 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC23A3Q6PIS1 610 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 GCNT7Q6ZNI0 430 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 Q6ZSR9 355 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 RASSF6Q6ZTQ3 369 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 XIRP1Q702N8 1843 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 UNC93AQ86WB7 457 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MIB1Q86YT6 1006 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CILP2Q8IUL8 1156 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NKAIN4Q8IVV8 208 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NAXDQ8IW45 347 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 RNF113BQ8IZP6 322 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 UBE2J2Q8N2K1 259 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ARL6IP6Q8N6S5 226 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 IL17RCQ8NAC3 791 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR4A15Q8NGL6 344 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 WDR36Q8NI36 951 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCARB1Q8WTV0 552 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 PCNPQ8WW12 178 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZFPM2Q8WW38 1151 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ASB12Q8WXK4 309 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 TCEAL3Q969E4 200 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NT5C3BQ969T7 300 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 NTAN1Q96AB6 310 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAD51AP1Q96B01 352 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 LCORQ96JN0 433 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 COQ10AQ96MF6 247 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 FCRL5Q96RD9 977 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF382Q96SR6 550 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 MYOCQ99972 504 aa4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 THUMPD3Q9BV44 507 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-213ENST00000488131 CINPQ9BW66 212 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms