RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR7A17O14581 309 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 PGRMC2O15173 223 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 HCN1O60741 890 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 WDR1O75083 606 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 ACSL3O95573 720 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 INHBAP08476 426 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 SLC35E2P0CK97 266 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 IGFBP2P18065 325 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 PIK3R1P27986 724 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 SSTR4P31391 388 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 ZFP36L2P47974 494 aaKnown RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 TRPC1P48995 793 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 TBL3Q12788 808 aaKnown RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 SGO1Q5FBB7 561 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 HLA-DQA1Q5Y7H0 255 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 RTL6Q6ICC9 239 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 DND1Q8IYX4 353 aaKnown RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 TAGAPQ8N103 731 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 LIX1Q8N485 282 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 ZNF559Q9BR84 538 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 DOHHQ9BU89 302 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 SLC6A15Q9H2J7 730 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 TEX10Q9NXF1 929 aaPredicted RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 CNIH4Q9P003 139 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 B4GALT7Q9UBV7 327 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 MTRF1LQ9UGC7 380 aaKnown RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 CHCHD2Q9Y6H1 151 aaPredicted RBP14.03□□□□□ -0.16
LIMS3-203ENST00000480744 IKBKGQ9Y6K9 419 aa14.03□□□□□ -0.16
LIMS3-203ENST00000480744 CELSR1Q9NYQ6 3014 aa14.02□□□□□ -0.16
LIMS3-203ENST00000480744 MED13LQ71F56 2210 aa14.02□□□□□ -0.16
LIMS3-203ENST00000480744 A0A0G2JNJ9 132 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 SMIM24O75264 130 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 SEMA3DO95025 777 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 CLPSP04118 112 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 KLK1P06870 262 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 RBP1P09455 135 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 ENDOUP21128 410 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 MYBPHQ13203 477 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 FRG2Q64ET8 278 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 TMEM200AQ86VY9 491 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 GALNT12Q8IXK2 581 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 DMRTC2Q8IXT2 367 aaPredicted RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 DIO2Q92813 273 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 NSUN5Q96P11 429 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 FRG2BQ96QU4 278 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 MRPL1Q9BYD6 325 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 PROK2Q9HC23 129 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 PSD3Q9NYI0 1048 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 XPR1Q9UBH6 696 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 Q9UFV3 132 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 DMGDHQ9UI17 866 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 PCTPQ9UKL6 214 aa14.02□□□□□ -0.17
LIMS3-203ENST00000480744 CNOT11Q9UKZ1 510 aaKnown RBP14.02□□□□□ -0.17
LIMS3-203ENST00000480744 TP53I11O14683 189 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 HOXD4P09016 255 aaPredicted RBP14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CTAGE8P0CG41 777 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 NT5EP21589 574 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 GDF1P27539 372 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 GALNSP34059 522 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 ADH7P40394 386 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 FBXW4P57775 412 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 IFT88Q13099 833 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 NTRK2Q16620 822 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CCNYL2Q5T2Q4 361 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 TMEM198Q66K66 360 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 WDR53Q7Z5U6 358 aaPredicted RBP14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CTAGE4Q8IX94 777 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CLYBLQ8N0X4 340 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 LRRC25Q8N386 305 aaPredicted RBP14.01□□□□□ -0.17
LIMS3-203ENST00000480744 OR4K14Q8NGD5 310 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 UHMK1Q8TAS1 419 aaKnown RBP14.01□□□□□ -0.17
LIMS3-203ENST00000480744 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 ZNF597Q96LX8 424 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 PAFAH2Q99487 392 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CDC42EP4Q9H3Q1 356 aaKnown RBP14.01□□□□□ -0.17
LIMS3-203ENST00000480744 CXorf21Q9HAI6 301 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 AHSPQ9NZD4 102 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 TMCO1Q9UM00 188 aa14.01□□□□□ -0.17
LIMS3-203ENST00000480744 C15orf38-AP3S2A0A0A6YYH1 394 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 CAPN14A8MX76 684 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 STX16-NPEPL1H3BU86 382 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 STX16O14662 325 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 TRAPPC6AO75865 159 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 CT62P0C5K7 136 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 GABRA1P14867 456 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 XKP51811 444 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 TRAF3Q13114 568 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 RPS6KA2Q15349 733 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 TSNAXIP1Q2TAA8 658 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 BICRALQ6AI39 1079 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 RPS27LQ71UM5 84 aaKnown RBP14□□□□□ -0.17
LIMS3-203ENST00000480744 PAGE2Q7Z2X7 111 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 MILR1Q7Z6M3 343 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 LIX1LQ8IVB5 337 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 PRR22Q8IZ63 422 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms