RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CRB3Q9BUF7 120 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CNPPD1Q9BV87 410 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PIF1Q9H611 641 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CXorf36Q9H7Y0 433 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 TRIM45Q9H8W5 580 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 EQTNQ9NQ60 294 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PNO1Q9NRX1 252 aaKnown RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 SLAMF8Q9P0V8 285 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ACSL6Q9UKU0 697 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ANGPT4Q9Y264 503 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PCDHGB3Q9Y5G1 929 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 B3GALT1Q9Y5Z6 326 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 SCN2AQ99250 2005 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ELOVL7A1L3X0 281 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 PRAMEF2O60811 474 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SCN2BO60939 215 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DNAJB6O75190 326 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 TNFSF15O95150 251 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CYC1P08574 325 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ZGLP1P0C6A0 271 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 HSD17B1P14061 328 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC5A2P31639 672 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 FOLR3P41439 243 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 GCGRP47871 477 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 EMP2P54851 167 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CLDN6P56747 220 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 OR4D2P58180 307 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DSTNP60981 165 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 RPS15P62841 145 aaKnown RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 GABREP78334 506 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 GAB1Q13480 694 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 LTB4RQ15722 352 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CEBPEQ15744 281 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 MPEG1Q2M385 716 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF750Q32MQ0 723 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 VWA2Q5GFL6 755 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 PIGGQ5H8A4 983 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 C6orf120Q7Z4R8 191 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SERPINA11Q86U17 422 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SPATA24Q86W54 205 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DHFR2Q86XF0 187 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 PROSER1Q86XN7 944 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 RNF130Q86XS8 419 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ZC3H7AQ8IWR0 971 aaKnown RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CACTIN-AS1Q8N1I8 211 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ESX1Q8N693 406 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 C11orf65Q8NCR3 313 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM52Q8NDY8 209 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ADCY4Q8NFM4 1077 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF675Q8TD23 568 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC26A7Q8TE54 656 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ZFP90Q8TF47 636 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 KAT2AQ92830 837 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 DAZLQ92904 295 aaKnown RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 UCN3Q969E3 161 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 POP5Q969H6 163 aaKnown RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM162AQ96A26 154 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ELP4Q96EB1 424 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 NEURL3Q96EH8 262 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 TGIF2Q9GZN2 237 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SOX17Q9H6I2 414 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 WDR54Q9H977 334 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 ADAP2Q9NPF8 381 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SLAMF7Q9NQ25 335 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 EXD2Q9NVH0 621 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CMTM6Q9NX76 183 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC25A37Q9NYZ2 338 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CTSFQ9UBX1 484 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 C3orf18Q9UK00 162 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 PACSIN3Q9UKS6 424 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 PADI1Q9ULC6 663 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 CFL2Q9Y281 166 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 SNX13Q9Y5W8 968 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 MUC6Q6W4X9 2439 aa9.63□□□□□ -0.87
PRPF38A-202ENST00000474048 A0A087WV62 115 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 MYOCOSA0A1B0GUC4 107 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 WASHC1A8K0Z3 465 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 C17orf105B2RV13 164 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 IDSB3KWA1 339 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 STMND1H3BQB6 276 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PCDH17O14917 1159 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 JRKO75564 520 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SOX30O94993 753 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 KCNK5O95279 499 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 IFNA14P01570 189 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 IGHEP01854 428 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 IFI6P09912 130 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ALOX5P09917 674 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 MATN1P21941 496 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 CD82P27701 267 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 HTR1EP28566 365 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 GALNSP34059 522 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms