RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PAQR8Q8TEZ7 354 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 LRCH3Q96II8 777 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PURBQ96QR8 312 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 LHX5Q9H2C1 402 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FTSJ1Q9UET6 329 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 QRICH2Q9H0J4 1663 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TRBV2A0A0J9YWF9 115 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SULT1C2O00338 296 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 MAFO75444 373 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 NTSR2O95665 410 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TIMP2P16035 220 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 OTX2P32243 289 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 GRM5P41594 1212 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 GABRA2P47869 451 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PRMT2P55345 433 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RPS13P62277 151 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RPL23AP62750 156 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SF3A2Q15428 464 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TRAM1Q15629 374 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 XYLT1Q86Y38 959 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF34Q8IZ26 560 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HORMAD2Q8N7B1 307 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FUNDC2Q9BWH2 189 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DEFB126Q9BYW3 111 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SLC25A51Q9H1U9 297 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 EBF2Q9HAK2 575 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RAB9BQ9NP90 201 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HEMK1Q9Y5R4 338 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RPS10-NUDT3A0A1W2PQS6 291 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DCDC2BA2VCK2 349 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF860A6NHJ4 632 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 F7P08709 466 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 POLR2CP19387 275 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TNFSF4P23510 183 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RPS10P46783 165 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF33AQ06730 810 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 COL9A2Q14055 689 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TRAM2Q15035 370 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RNASE10Q5GAN6 216 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 AGAP7PQ5VUJ5 663 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 AGAP6Q5VW22 663 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KIAA1614Q5VZ46 1190 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PRSS55Q6UWB4 352 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 IL20RBQ6UXL0 311 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FBXW12Q6X9E4 464 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KCTD20Q7Z5Y7 419 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 S100A7AQ86SG5 101 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 BBS10Q8TAM1 723 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 IL1F10Q8WWZ1 152 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ACOT11Q8WXI4 607 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ISOC1Q96CN7 298 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FBXL20Q96IG2 436 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 AGAP4Q96P64 663 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TUBA1CQ9BQE3 449 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 NXF5Q9H1B4 397 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 NENFQ9UMX5 172 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SCML2Q9UQR0 700 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CASZ1Q86V15 1759 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 OR51F1A6NGY5 319 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CBY3A6NI87 242 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 D6RAR5 112 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 UBFD1O14562 309 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 MATN3O15232 486 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CILPO75339 1184 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HOXA9P31269 272 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HOXC8P31273 242 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ADRA1BP35368 520 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HK3P52790 923 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 C22orf42Q6IC83 251 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ARHGAP11AQ6P4F7 1023 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FAM199XQ6PEV8 388 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 IDO2Q6ZQW0 420 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CDHR3Q6ZTQ4 885 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 FJX1Q86VR8 437 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 BAGE3Q86Y29 109 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 BAGE2Q86Y30 109 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM185AQ8NFB2 350 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 BEST4Q8NFU0 473 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PPP1R35Q8TAP8 253 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 STT3BQ8TCJ2 826 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KCTD13Q8WZ19 329 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PIP5K1AQ99755 562 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SGIP1Q9BQI5 828 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TCEAL2Q9H3H9 227 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 LIN28AQ9H9Z2 209 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KCNIP2Q9NS61 270 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 POMPQ9Y244 141 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ADGRL3Q9HAR2 1447 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF536O15090 1300 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ACOT7O00154 380 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 DCNP07585 359 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 UCHL1P09936 223 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SELPP16109 830 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GABRR1P24046 479 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 PTAFRP25105 342 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RORAP35398 523 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms