RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 HMG20AQ9NP66 347 aa10.04□□□□□ -0.8
CALD1-210ENST00000443197 LYARQ9NX58 379 aaKnown RBP10.04□□□□□ -0.8
CALD1-210ENST00000443197 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
CALD1-210ENST00000443197 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 ABCB7O75027 752 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TFAP2AP05549 437 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CBLP22681 906 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 ACADLP28330 430 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TIGD6Q17RP2 521 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 C1orf189Q5VU69 101 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 USP30Q70CQ3 517 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 OR2L8Q8NGY9 312 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TM4SF18Q96CE8 201 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 IFT27Q9BW83 186 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 MS4A12Q9NXJ0 267 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 AGAP14A8MT82 685 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TMPRSS11DO60235 418 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 PRAMEF10O60809 474 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 AIFM1O95831 613 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 HIST1H2ABP04908 130 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 PRG2P13727 222 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 GNSP15586 552 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 PORP16435 677 aaPredicted RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 KIAA0040Q15053 153 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 LTB4RQ15722 352 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TIMM50Q3ZCQ8 353 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CMPK2Q5EBM0 449 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 SHQ1Q6PI26 577 aaKnown RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 HIST3H2AQ7L7L0 130 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CCDC103Q8IW40 242 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 NLGN4XQ8N0W4 816 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 HIST1H2ACQ93077 130 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 ZNF300Q96RE9 604 aaPredicted RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 PTGFRNQ9P2B2 879 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CDV3Q9UKY7 258 aaKnown RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 SPTBP11277 2137 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 H0YJX3 145 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 SLC1A7O00341 560 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 GFRA2O00451 464 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 PCDH17O14917 1159 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 KHNYNO15037 678 aaKnown RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 KCNJ13O60928 360 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 MT-ND2P03891 347 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 ALPLP05186 524 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CD6P30203 668 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 PCGF2P35227 344 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 CHERPQ8IWX8 916 aaKnown RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 FBXL6Q8N531 539 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 OR52P1PQ8NH57 321 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 THAP3Q8WTV1 239 aaPredicted RBP10.03□□□□□ -0.8
CALD1-210ENST00000443197 SLC6A18Q96N87 628 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 SGPP1Q9BX95 441 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 TSSK6Q9BXA6 273 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 OSBPL10Q9BXB5 764 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 NAALAD2Q9Y3Q0 740 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 ENPP4Q9Y6X5 453 aa10.03□□□□□ -0.8
CALD1-210ENST00000443197 SMIM30A4D0T7 59 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 H0YGG7 62 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 J3QRK9 145 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 SEMA3DO95025 777 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 MED26O95402 600 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 CKMT1AP12532 417 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 TCF3P15923 654 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 COL9A1P20849 921 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 TPP2P29144 1249 aaPredicted RBP10.02□□□□□ -0.8
CALD1-210ENST00000443197 ARF3P61204 181 aaPredicted RBP10.02□□□□□ -0.8
CALD1-210ENST00000443197 VBP1P61758 197 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 TXNL4AP83876 142 aaKnown RBP10.02□□□□□ -0.8
CALD1-210ENST00000443197 ST3GAL4Q11206 333 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 TDGQ13569 410 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 GINS1Q14691 196 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 GPR19Q15760 415 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 LEXMQ3ZCV2 418 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 NHSL2Q5HYW2 709 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 OR9A4Q8NGU2 314 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 ISOC1Q96CN7 298 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 PRR14Q9BWN1 585 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 CD93Q9NPY3 652 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 NLGN3Q9NZ94 848 aa10.02□□□□□ -0.8
CALD1-210ENST00000443197 FAM25AB3EWG3 89 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 FAM25CB3EWG5 89 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 FAM25GB3EWG6 89 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 SLC25A12O75746 678 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 PROS1P07225 676 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 GPX2P18283 190 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 ATP5A1P25705 553 aaKnown RBP10.02□□□□□ -0.81
CALD1-210ENST00000443197 TUBA4AP68366 448 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 ST3GAL3Q11203 375 aa10.02□□□□□ -0.81
CALD1-210ENST00000443197 EIF2B5Q13144 721 aaKnown RBP10.02□□□□□ -0.81
CALD1-210ENST00000443197 EXOSC7Q15024 291 aaKnown RBP10.02□□□□□ -0.81
CALD1-210ENST00000443197 PHF19Q5T6S3 580 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms