RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TRIM40Q6P9F5 258 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF782Q6ZMW2 699 aaPredicted RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 USP45Q70EL2 814 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 GALNT11Q8NCW6 608 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 AP2M1Q96CW1 435 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 CAPNS2Q96L46 248 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 KCNJ15Q99712 375 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 ATF6BQ99941 703 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 ING4Q9UNL4 249 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 NCKAP1Q9Y2A7 1128 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 GSTK1Q9Y2Q3 226 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 KCNE2Q9Y6J6 123 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 PRRG1O14668 218 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 TSPAN4O14817 238 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 LZTS3O60299 673 aaPredicted RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 IFNA14P01570 189 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 NAGAP17050 411 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 SOX18P35713 384 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 C21orf58P58505 322 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 WDR5P61964 334 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 DEF8Q6ZN54 512 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 COMMD7Q86VX2 200 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 THOC6Q86W42 341 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 MED18Q9BUE0 208 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 MED28Q9H204 178 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 RC3H2Q9HBD1 1191 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 TRAV6A0A075B6T7 132 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SHISA3A0PJX4 238 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SERTM1A2A2V5 107 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 TRIM77I1YAP6 450 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 TBL1XO60907 577 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 PAHP00439 452 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 NR2F6P10588 404 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF8P17098 575 aaPredicted RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SDHBP21912 280 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 ELAVL4P26378 380 aaKnown RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SMAD3P84022 425 aaKnown RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 BCL2L1Q07817 233 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 MFSD13AQ14CX5 517 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 ANGPT1Q15389 498 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SYT14P1Q58G82 188 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 QSOX2Q6ZRP7 698 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 DPCDQ9BVM2 203 aaPredicted RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SPNS1Q9H2V7 528 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 TMEM38AQ9H6F2 299 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 DDCP20711 480 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 SSTR2P30874 369 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 RPS13P62277 151 aaKnown RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 CSTF1Q05048 431 aaKnown RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 CDKN3Q16667 212 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 MPEG1Q2M385 716 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 GPR33Q49SQ1 333 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 OXR1Q8N573 874 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 WFDC6Q9BQY6 131 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 TMED9Q9BVK6 235 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 RSPO3Q9BXY4 272 aaPredicted RBP19.24■□□□□ 0.67
SHOX2-203ENST00000441443 TBC1D17Q9HA65 648 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 ZFP64Q9NPA5 681 aa19.24■□□□□ 0.67
SHOX2-203ENST00000441443 A0A1B0GVC2 190 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 A6NIN4 97 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 LANCL1O43813 399 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 PCBP3P57721 371 aaKnown RBP19.23■□□□□ 0.67
SHOX2-203ENST00000441443 SNTA1Q13424 505 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 NAE1Q13564 534 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 TPGS1Q6ZTW0 290 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 PLEKHM3Q6ZWE6 761 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 C16orf62Q7Z3J2 963 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 CAMKMTQ7Z624 323 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 LRRC17Q8N6Y2 441 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 CDCP1Q9H5V8 836 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 ZDHHC3Q9NYG2 299 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 KCND3Q9UK17 655 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 ANGPT4Q9Y264 503 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 ARRDC5A6NEK1 342 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 NPIPB15A6NHN6 443 aaPredicted RBP19.23■□□□□ 0.67
SHOX2-203ENST00000441443 SYPP08247 313 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 BDKRB1P46663 353 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 LSM11P83369 360 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHOX2-203ENST00000441443 GPR176Q14439 515 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF630Q2M218 657 aaPredicted RBP19.23■□□□□ 0.67
SHOX2-203ENST00000441443 ADGRF1Q5T601 910 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 OR11H7Q8NGC8 314 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 NDOR1Q9UHB4 597 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 STOML2Q9UJZ1 356 aa19.23■□□□□ 0.67
SHOX2-203ENST00000441443 QSOX1O00391 747 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 RAF1P04049 648 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 TIA1P31483 386 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 RPA4Q13156 261 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 KCTD20Q7Z5Y7 419 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 MEX3DQ86XN8 651 aaKnown RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 CREB3L1Q96BA8 519 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 VN1R3Q9BXE9 311 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 PIGUQ9H490 435 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 HEXA-AS1Q9H8Q6 139 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 C2orf92A0A1B0GVN3 265 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 NNMTP40261 264 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 OCLNQ16625 522 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms