RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GPR39O43194 453 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 PCDH7O60245 1069 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 HBP1O60381 514 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RECQL4O94761 1208 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 ATG12O94817 140 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 ALPIP09923 528 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 GABRA5P31644 462 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 WNT3P56703 355 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 SOX4Q06945 474 aaPredicted RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 FGL2Q14314 439 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 FGD2Q7Z6J4 655 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 ZER1Q7Z7L7 766 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 MCATQ8IVS2 390 aaKnown RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 ZDHHC1Q8WTX9 485 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 APIPQ96GX9 242 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 APOLD1Q96LR9 279 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 PRKAG2Q9UGJ0 569 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 HACL1Q9UJ83 578 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RAB19A4D1S5 217 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 TRABD2BA6NFA1 517 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 PRPS2P11908 318 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RAB3BP20337 219 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 C4BPBP20851 252 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 PCGF2P35227 344 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 MAPKAPK2P49137 400 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RIPPLY1Q0D2K3 151 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 SP140Q13342 867 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 PLD1Q13393 1074 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 TTLL4Q14679 1199 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 RNLSQ5VYX0 342 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 SHFQ7M4L6 423 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 HUS1BQ8NHY5 278 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 SCARB1Q8WTV0 552 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.46
HERC3-203ENST00000407637 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 OR4K3Q96R72 315 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 CACNG6Q9BXT2 260 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 TRPS1Q9UHF7 1281 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 UBQLN1Q9UMX0 589 aaKnown RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 D6RAR5 112 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 H3BN98 237 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 SCN2BO60939 215 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
HERC3-203ENST00000407637 ACAA1P09110 424 aaPredicted RBP12.14□□□□□ -0.47
HERC3-203ENST00000407637 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 CD9P21926 228 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 FGF9P31371 208 aaPredicted RBP12.14□□□□□ -0.47
HERC3-203ENST00000407637 LIMS1P48059 325 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 EPHA4P54764 986 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 HMGCS2P54868 508 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 SWI5Q1ZZU3 235 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 ZRANB3Q5FWF4 1079 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 IDNKQ5T6J7 187 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 VASNQ6EMK4 673 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 CASP12Q6UXS9 341 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 NAGSQ8N159 534 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 IQCF1Q8N6M8 205 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 C2CD4CQ8TF44 421 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 SELENOMQ8WWX9 145 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 ADAMTS14Q8WXS8 1223 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 TADA1Q96BN2 335 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 FCRL1Q96LA6 429 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 TBC1D17Q9HA65 648 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 CHST2Q9Y4C5 530 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 TRBV23-1A0A0A0MS06 115 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 DVL2O14641 736 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 IRAK2O43187 625 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 EIF3GO75821 320 aaKnown RBP eCLIP12.14□□□□□ -0.47
HERC3-203ENST00000407637 GATBO75879 557 aaKnown RBP12.14□□□□□ -0.47
HERC3-203ENST00000407637 TFP02787 698 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 RLN2P04090 185 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 NR2F6P10588 404 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 COX7A2P14406 83 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 DRD5P21918 477 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
HERC3-203ENST00000407637 MTAPQ13126 283 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 GAB1Q13480 694 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 SV2CQ496J9 727 aa12.14□□□□□ -0.47
HERC3-203ENST00000407637 ANGPTL8Q6UXH0 198 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms