RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 AMER3Q8N944 861 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FAM46DQ8NEK8 389 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 OR4E2Q8NGC2 313 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 RAB8BQ92930 207 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TM4SF19Q96DZ7 209 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 BMFQ96LC9 184 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PINK1Q9BXM7 581 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ITPAQ9BY32 194 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CLN6Q9NWW5 311 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF624Q9P2J8 865 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TRPC4Q9UBN4 977 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 B3GNT3Q9Y2A9 372 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PIAS3Q9Y6X2 628 aa16.73■□□□□ 0.27
HLA-DQB1-204ENST00000399084 A6NCN8 305 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 J3KTA2 159 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FFAR1O14842 300 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 AIFM1O95831 613 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 IFI6P09912 130 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PIPP12273 146 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 BUD31P41223 144 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 STT3AP46977 705 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ENTPD1P49961 510 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 LIM2P55344 173 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SNRPGP62308 76 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SUZ12Q15022 739 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SMN1Q16637 294 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DGUOKQ16854 277 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 AHSA2Q719I0 299 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 S100ZQ8WXG8 99 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLC38A4Q969I6 547 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PPP1R14BQ96C90 147 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 MSLNLQ96KJ4 702 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SERINC2Q96SA4 455 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FZD3Q9NPG1 666 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 C5AR2Q9P296 337 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FTSJ1Q9UET6 329 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DUSP12Q9UNI6 340 aa16.72■□□□□ 0.27
HLA-DQB1-204ENST00000399084 C10orf142B7Z368 130 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 M0R3G1 203 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TRANK1O15050 2925 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ERAL1O75616 437 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 LGI1O95970 557 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 GASTP01350 101 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF12P17014 697 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TLX1P31314 330 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CTSKP43235 329 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 IDH2P48735 452 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 MASP1P48740 699 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 UGT2B15P54855 530 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SRP54P61011 504 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 BNIP3Q12983 259 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ATAD3BQ5T9A4 648 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 KLHL17Q6TDP4 642 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 OR9Q2Q8NGE9 314 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FAM174AQ8TBP5 190 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 UTP15Q8TED0 518 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 RSC1A1Q92681 617 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 GGHQ92820 318 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CNRIP1Q96F85 164 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF681Q96N22 645 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 RACGAP1Q9H0H5 632 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SERHL2Q9H4I8 314 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF226Q9NYT6 803 aa16.71■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PGRMC2O15173 223 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 VIPP01282 170 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SMIM10L1P0DMW3 83 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 NR2F6P10588 404 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ELAVL4P26378 380 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PSMB9P28065 219 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 IFNA8P32881 189 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ACTR1BP42025 376 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RABIFP47224 123 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TPMTP51580 245 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCR5P51681 352 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C21orf59P57076 290 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ACTR1AP61163 376 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ILF3Q12906 894 aaKnown RBP eCLIP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RPS26P11Q5JNZ5 115 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CAMKVQ8NCB2 501 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 UBE2FQ969M7 185 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ELP4Q96EB1 424 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SMIM10Q96HG1 83 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FUZQ9BT04 418 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CDCA4Q9BXL8 241 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC6A17Q9H1V8 727 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ANKRD19PQ9H560 264 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 APOBEC3BQ9UH17 382 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PNMA8BQ9ULN7 279 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DOCK9Q9BZ29 2069 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A0A0G2JN53 185 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PPM1DO15297 605 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 UGT2B17O75795 530 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SOX30O94993 753 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FADS2O95864 444 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 IGLV3-19P01714 112 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 HMGN2P05204 90 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GSTM3P21266 225 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CHMP24386 653 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms