RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TMEM184CQ9NVA4 438 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 POU2F3Q9UKI9 436 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CAMK2AQ9UQM7 478 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ANTXRLA6NF34 631 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 FABP12A6NFH5 140 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 RNASET2O00584 256 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SLC9A3R1O14745 358 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 GNB5O14775 395 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 GREM1O60565 184 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CTSLP07711 333 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TGFBR2P37173 567 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 VEGFBP49765 207 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ERVFC1P60507 584 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PIN1Q13526 163 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MINDY4Q4G0A6 757 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 LAPTM4BQ86VI4 370 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 HDDC3Q8N4P3 179 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 DYNC2LI1Q8TCX1 351 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MMP27Q9H306 513 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 FZD3Q9NPG1 666 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CMAHPQ9Y471 501 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ITGB4P16144 1822 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TRBV5-3A0A0A0MS03 114 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CLDN24A6NM45 220 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 RB1P06400 928 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MYL12AP19105 171 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MSX1P28360 303 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PPP5CP53041 499 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 COPZ1P61923 177 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ERN2Q76MJ5 926 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 RAB43Q86YS6 212 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CCDC116Q8IYX3 515 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CELF2-AS1Q8N7Q2 184 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 C7orf34Q96L11 122 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM245Q9H330 911 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 INIPQ9NRY2 104 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TRBV4-1A0A0J9YWV2 114 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PSIP1O75475 530 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CSF2P04141 144 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ARAFP10398 606 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PCMT1P22061 227 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SMIM11AP58511 58 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TAS2R41P59536 307 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SLC35A2P78381 396 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CD300CQ08708 224 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MTAPQ13126 283 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CTF1Q16619 201 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 B3GLCTQ6Y288 498 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 B3GNT7Q8NFL0 401 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TM4SF18Q96CE8 201 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ECHDC3Q96DC8 303 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TTTY10Q9BZA0 68 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 RNF121Q9H920 327 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ANKRA2Q9H9E1 313 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TM7SF3Q9NS93 570 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 FLVCR2Q9UPI3 526 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 IFT52Q9Y366 437 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 NUP214P35658 2090 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 INTS1Q8N201 2190 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ALPPP05187 535 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ADORA3P0DMS8 318 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 NPPBP16860 134 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CPN2P22792 545 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 KHKP50053 298 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 HEPACAMQ14CZ8 416 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 BCL7AQ4VC05 210 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 FRMPD2BQ6IN97 320 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL17Q6TDP4 642 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CADM3Q8N126 398 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PARP16Q8N5Y8 322 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 GNPDA2Q8TDQ7 276 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF689Q96CS4 500 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MRGPRX3Q96LB0 322 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MYNNQ9NPC7 610 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SPATA6Q9NWH7 488 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 LRRC37AA6NMS7 1700 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MYO16Q9Y6X6 1858 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 A6NL46 340 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SULT1C4O75897 302 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 DNAJB5O75953 348 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CD72P21854 359 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CSTF2P33240 577 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TIE1P35590 1138 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 AVPR1BP47901 424 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OXA1LQ15070 435 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF311Q5JNZ3 666 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAM46CQ5VWP2 391 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KDM4DQ6B0I6 523 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CCBE1Q6UXH8 406 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 AMZ2Q86W34 360 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C19orf18Q8NEA5 215 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PIK3R3Q92569 461 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C3orf49Q96BT1 292 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MMP28Q9H239 520 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 GSAPA4D1B5 854 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SOBPA7XYQ1 873 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAAHO00519 579 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms