RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ISL2Q96A47 359 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 C14orf79Q96F83 325 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 TTYH2Q9BSA4 534 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 ALKBH4Q9NXW9 302 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 ACAD8Q9UKU7 415 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 CNOT11Q9UKZ1 510 aaKnown RBP15.26■□□□□ 0.03
PTPRK-208ENST00000392449 ANKRD17O75179 2603 aaKnown RBP15.25■□□□□ 0.03
PTPRK-208ENST00000392449 TRGV5A0A0B4J1U4 118 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 A0A0G2JNJ9 132 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 CCDC189A1A4V9 331 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 OR14I1A6ND48 311 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 AQP7O14520 342 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 BCKDKO14874 412 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 MSX1P28360 303 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 ADH7P40394 386 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 TRPC1P48995 793 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 ARFIP1P53367 373 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 FBXW4P57775 412 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 FRG2Q64ET8 278 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 TTC19Q6DKK2 380 aaPredicted RBP15.25■□□□□ 0.03
PTPRK-208ENST00000392449 OR52E8Q6IFG1 317 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 LIX1LQ8IVB5 337 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 PRR22Q8IZ63 422 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF441Q8N8Z8 693 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 OR4F6Q8NGB9 312 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 FRG2BQ96QU4 278 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 SERPINI1Q99574 410 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 PELOQ9BRX2 385 aaKnown RBP15.25■□□□□ 0.03
PTPRK-208ENST00000392449 WDR41Q9HAD4 459 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 CXorf21Q9HAI6 301 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 MCCC2Q9HCC0 563 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 ZFP64Q9NPA5 681 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 KCNJ16Q9NPI9 418 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.25■□□□□ 0.035e-7■■■□□ 17.8
PTPRK-208ENST00000392449 Q9UFV3 132 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 MTRF1LQ9UGC7 380 aaKnown RBP15.25■□□□□ 0.03
PTPRK-208ENST00000392449 EXPH5Q8NEV8 1989 aa15.25■□□□□ 0.03
PTPRK-208ENST00000392449 FIGNL2A6NMB9 653 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 TRIM49D1C9J1S8 452 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 SUSD5O60279 629 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 SBK3P0C264 359 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 SLC35E2P0CK97 266 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 CDH13P55290 713 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 BIKQ13323 160 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 B3GNT6Q6ZMB0 384 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 ACAD11Q709F0 780 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 RELL1Q8IUW5 271 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 SLC15A4Q8N697 577 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 DCAKDQ8WVC6 231 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 HBEGFQ99075 208 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 DOHHQ9BU89 302 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 NTMT1Q9BV86 223 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 FUT8Q9BYC5 575 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 BOKQ9UMX3 212 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-208ENST00000392449 DTX4Q9Y2E6 619 aa15.24■□□□□ 0.03
PTPRK-208ENST00000392449 C2orf92A0A1B0GVN3 265 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 KDM4EB2RXH2 506 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-208ENST00000392449 STX16-NPEPL1H3BU86 382 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 STX16O14662 325 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 SEMA3DO95025 777 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 RBP1P09455 135 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 PIK3R1P27986 724 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 SERPINB3P29508 390 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 WNT3P56703 355 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 SNTB1Q13884 538 aaKnown RBP15.23■□□□□ 0.03
PTPRK-208ENST00000392449 NNATQ16517 81 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 NTRK2Q16620 822 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 WHAMMP3Q1A5X7 153 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 CCNYL2Q5T2Q4 361 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 FAM180BQ6P0A1 224 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 LETMD1Q6P1Q0 360 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 METTL2BQ6P1Q9 378 aaKnown RBP15.23■□□□□ 0.03
PTPRK-208ENST00000392449 GALNT12Q8IXK2 581 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 LRRC25Q8N386 305 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-208ENST00000392449 MMGT1Q8N4V1 131 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 SIMC1Q8NDZ2 872 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 C7orf57Q8NEG2 295 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 FMO2Q99518 471 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 PSD3Q9NYI0 1048 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 ARHGAP21Q5T5U3 1957 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 HIVEP1P15822 2718 aa15.23■□□□□ 0.03
PTPRK-208ENST00000392449 OR6C76A6NM76 312 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 SMIM24O75264 130 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 PDYNP01213 254 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 RPS17P08708 135 aaKnown RBP15.22■□□□□ 0.03
PTPRK-208ENST00000392449 NT5EP21589 574 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 XKP51811 444 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 IFT88Q13099 833 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 TCHHL1Q5QJ38 904 aaPredicted RBP15.22■□□□□ 0.03
PTPRK-208ENST00000392449 C1orf185Q5T7R7 199 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 WLSQ5T9L3 541 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 DESI1Q6ICB0 168 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 COMMD6Q7Z4G1 85 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 MILR1Q7Z6M3 343 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 CDH24Q86UP0 819 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 DMRTC2Q8IXT2 367 aaPredicted RBP15.22■□□□□ 0.03
PTPRK-208ENST00000392449 TMEM151AQ8N4L1 468 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
PTPRK-208ENST00000392449 OR4K14Q8NGD5 310 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms