RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 IQCMA0A1B0GVH7 501 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PPM1DO15297 605 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC31A2O15432 143 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ADAM12O43184 909 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 RBBP9O75884 186 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CYP4B1P13584 511 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TSPAN8P19075 237 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PTBP1P26599 531 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ACADLP28330 430 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CTNNB1P35222 781 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ECI1P42126 302 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC1A2P43004 574 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TAS2R60P59551 318 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 BTG1P62324 171 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ELP6Q0PNE2 266 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PON3Q15166 354 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TIMM50Q3ZCQ8 353 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 VPS26BQ4G0F5 336 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 RABL3Q5HYI8 236 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SPOUT1Q5T280 376 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 FAM171A1Q5VUB5 890 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 KIAA0930Q6ICG6 404 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 FAM131AQ6UXB0 335 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC41A1Q8IVJ1 513 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CENPLQ8N0S6 344 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 HMCESQ96FZ2 354 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 IMP4Q96G21 291 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CYP2S1Q96SQ9 504 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 RAD9AQ99638 391 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ORAI3Q9BRQ5 295 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SEMA4CQ9C0C4 833 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ACTR6Q9GZN1 396 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 C11orf49Q9H6J7 331 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ATP13A1Q9HD20 1204 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC52A3Q9NQ40 469 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC22A11Q9NSA0 550 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM248Q9NWD8 314 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM161AQ9NX61 479 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 POLG2Q9UHN1 485 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CLEC4AQ9UMR7 237 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 HIF3AQ9Y2N7 669 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CLCA3PQ9Y6N3 262 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 GLYATL1P3A0A0U1RQE8 302 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FAM95CA0A1B0GW59 222 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 OR6C75A6NL08 312 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 J3KR12 359 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CDC7O00311 574 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SOX30O94993 753 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MATN4O95460 622 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CST1P01037 141 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 APOC3P02656 99 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CHRM5P08912 532 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NMBP08949 121 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ALDOCP09972 364 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 HAPLN1P10915 354 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ANXA3P12429 323 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PAMP19021 973 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 RAB3BP20337 219 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 YWHAQP27348 245 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 AVPR1AP37288 418 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DCTP40126 519 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 RAB4BP61018 213 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 RAB10P61026 200 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DSC2Q02487 901 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SLC10A7Q0GE19 358 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DGKKQ5KSL6 1271 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TSTD2Q5T7W7 516 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MARC1Q5VT66 337 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC66Q68CR7 880 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FBXL22Q6P050 247 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FIGNL1Q6PIW4 674 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CEP97Q8IW35 865 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF655Q8N720 491 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 OR6C4Q8NGE1 309 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 UCN3Q969E3 161 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FBXO32Q969P5 355 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CREB3L1Q96BA8 519 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC46Q96FV0 321 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ITCHQ96J02 903 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 COQ10AQ96MF6 247 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 GPR78Q96P69 363 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 GFM1Q96RP9 751 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NEU1Q99519 415 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 C19orf43Q9BQ61 176 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 BARHL1Q9BZE3 327 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 GPR62Q9BZJ7 368 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NKX6-2Q9C056 277 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ADAM19Q9H013 955 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PRMT8Q9NR22 394 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 OLA1Q9NTK5 396 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SLCO1C1Q9NYB5 712 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 HCN3Q9P1Z3 774 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NLKQ9UBE8 527 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms