RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 LATO43561 262 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 CD3GP09693 182 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 HSD3B1P14060 373 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 HSD3B2P26439 372 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 ARSDP51689 593 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 RAB6CQ53S08 254 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 TRIB2Q92519 343 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 NEDD4LQ96PU5 975 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 RAB6CQ9H0N0 254 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 PPM1BO75688 479 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 FAM180BQ6P0A1 224 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 IL22RA1Q8N6P7 574 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 VRTNQ9H8Y1 702 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 DUSP3P51452 185 aaPredicted RBP21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 CCDC58Q4VC31 144 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 TSPAN33Q86UF1 283 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 CLECL1Q8IZS7 167 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 SCGB1C1Q8TD33 95 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 PEX11GQ96HA9 241 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 HPRP00739 348 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 MT-ND2P03891 347 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 GKN3PP0CG01 181 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 RNH1P13489 461 aaKnown RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 NIPAL4Q0D2K0 466 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 SERINC5Q86VE9 423 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 NECAB3Q96P71 396 aaPredicted RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 FAM227AF5H4B4 570 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 GABBR2O75899 941 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 MAS1P04201 325 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 RHCEP18577 417 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 OXTRP30559 389 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 TMBIM6P55061 237 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 NFE2L1Q14494 772 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 UGT3A2Q3SY77 523 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 DNAAF1Q8NEP3 725 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 C7orf34Q96L11 122 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ZNF778Q96MU6 729 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 NELL2Q99435 816 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 RGS9O75916 674 aaPredicted RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 PORP16435 677 aaPredicted RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ALG10BQ5I7T1 473 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 Q8N402 240 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ENDOVQ8N8Q3 282 aaKnown RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ZNF420Q8TAQ5 688 aaPredicted RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 KCNIP3Q9Y2W7 256 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 DNMT3AQ9Y6K1 912 aaPredicted RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 RTP2Q5QGT7 225 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 FAM46AQ96IP4 442 aaKnown RBP21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 SMCO3A2RU48 225 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 UNCXA6NJT0 531 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ETFAP13804 333 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ZXDBP98169 803 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 KIAA0319Q5VV43 1072 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 KBTBD6Q86V97 674 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 TP53INP2Q8IXH6 220 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 ABHD5Q8WTS1 349 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 PEX13Q92968 403 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 LRR1Q96L50 414 aa21.15■□□□□ 0.98
TM9SF3-201ENST00000371142 LTN1O94822 1766 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 H7C417 338 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 KIAA0513O60268 411 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 AMY2BP19961 511 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 PGCP20142 388 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 HSD11B2P80365 405 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 ELAVL3Q14576 367 aaKnown RBP21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 TCEAL1Q15170 157 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 KANK2Q63ZY3 851 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 DCDC5Q6ZRR9 648 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 OR52E2Q8NGJ4 325 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 BADQ92934 168 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 MAB21L2Q9Y586 359 aa21.14■□□□□ 0.98
TM9SF3-201ENST00000371142 A6NCN8 305 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 A6NLC8 198 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 OR5K4A6NMS3 321 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 UGT2B10P36537 528 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 BOCQ9BWV1 1114 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 SEC14L5O43304 696 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 PET100P0DJ07 73 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 BPIP17213 487 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 GRIA2P42262 883 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF100Q8IYN0 542 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 BACE2Q9Y5Z0 518 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 ABCC6O95255 1503 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 SIM1P81133 766 aaPredicted RBP21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 OR52E8Q6IFG1 317 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM185BQ9H7F4 350 aa21.14■□□□□ 0.97
TM9SF3-201ENST00000371142 SH3PXD2BA1X283 911 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 IQCF3P0C7M6 154 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 GGT2P36268 569 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 SHC2P98077 582 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 NPRL3Q12980 569 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 OR6Q1Q8NGQ2 317 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 FAM118AQ9NWS6 357 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 PIK3C2AO00443 1686 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 PCDH17O14917 1159 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 CD70P32970 193 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 VIPR2P41587 438 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms