RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 FNDC8Q8TC99 324 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PKP2Q99959 881 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 MVB12BQ9H7P6 319 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PDE7BQ9NP56 450 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ACSS2Q9NR19 701 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 JRKO75564 520 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 RFC2P35250 354 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 C14orf28Q4W4Y0 310 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SCML4Q8N228 414 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 LRRC25Q8N386 305 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 DEFB118Q96PH6 123 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CDC6Q99741 560 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 EBF4Q9BQW3 602 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 TMEM175Q9BSA9 504 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SNAPINO95295 136 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CSTAP01040 98 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 HMGCS1Q01581 520 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PGAP1Q75T13 922 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ANKRD13BQ86YJ7 626 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SGPP2Q8IWX5 399 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 OR5P2Q8WZ92 322 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 RPL10LQ96L21 214 aaKnown RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ABCG5Q9H222 651 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CYP8B1Q9UNU6 501 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SEC16AO15027 2179 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CERS1P27544 350 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CHRNB4P30926 498 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SUOXP51687 545 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 COQ5Q5HYK3 327 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 AGTRAPQ6RW13 159 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 LIX1LQ8IVB5 337 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ACBD7Q8N6N7 88 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ENDOVQ8N8Q3 282 aaKnown RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 C2CD4AQ8NCU7 369 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 OR5M3Q8NGP4 307 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ARHGAP9Q9BRR9 750 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CD48P09326 243 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 TGFBIQ15582 683 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 TPRG1Q6ZUI0 275 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 OR4F6Q8NGB9 312 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 XPNPEP1Q9NQW7 623 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 HEBP1Q9NRV9 189 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 SHPRHQ149N8 1683 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 PCDH17O14917 1159 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 PABPC4LP0CB38 370 aaKnown RBP14.83□□□□□ -0.03
HCFC1-201ENST00000310441 G6PDP11413 515 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 CKMT2P17540 419 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 FLT3LGP49771 235 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 PLGLAQ15195 96 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 MBLAC2Q68D91 279 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 GDPGP1Q6ZNW5 385 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 ANKK1Q8NFD2 765 aa14.83□□□□□ -0.03
HCFC1-201ENST00000310441 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 NFATC2Q13469 925 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 FAM69AQ5T7M9 428 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 PRRT1Q99946 306 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 GOLGA2P5Q9HBQ8 144 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 RDH16O75452 317 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 CREB1P16220 341 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 BDKRB2P30411 391 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 WASP42768 502 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 NR4A2P43354 598 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 RNASE10Q5GAN6 216 aaKnown RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 CCNJQ5T5M9 372 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 LYSMD3Q7Z3D4 306 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 ZDHHC2Q9UIJ5 367 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 C6orf47O95873 294 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 ELOCQ15369 112 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF674Q2M3X9 581 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 MYLK3Q32MK0 819 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 AWAT2Q6E213 333 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 TEX26Q8N6G2 289 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 CNOT11Q9UKZ1 510 aaKnown RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 GGT2P36268 569 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 UFM1P61960 85 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 MRPS10P82664 201 aaKnown RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 OR2T4Q8NH00 348 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 PPP1R35Q8TAP8 253 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 MCHR1Q99705 422 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 RNF19AQ9NV58 838 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 PPP4R1LQ9P1A2 415 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 hCG_1807616A0A1W2PRN6 198 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 UBFD1O14562 309 aaKnown RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 KHNYNO15037 678 aaKnown RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 HACD4Q5VWC8 232 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 TMEM173Q86WV6 379 aaPredicted RBP14.83□□□□□ -0.04
HCFC1-201ENST00000310441 DLGAP4Q9Y2H0 992 aa14.83□□□□□ -0.04
HCFC1-201ENST00000310441 RNF212BA8MTL3 300 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF701M0R085 212 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 P2RX6O15547 441 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PGCP20142 388 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 RPS13P62277 151 aaKnown RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CMASQ8NFW8 434 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 FAIMQ9NVQ4 179 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 NIPAL4Q0D2K0 466 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 EXOC3L2Q2M3D2 409 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 SUSD3Q96L08 255 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms