RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 IL1RL2Q9HB29 575 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FANCEQ9HB96 536 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PDFQ9HBH1 243 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ATAD3AQ9NVI7 634 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FAM118AQ9NWS6 357 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PLA2G3Q9NZ20 509 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 NLGN3Q9NZ94 848 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 KLHL42Q9P2K6 505 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TRMT6Q9UJA5 497 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 C3orf18Q9UK00 162 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF225Q9UK10 706 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PDE10AQ9Y233 779 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 CRYL1Q9Y2S2 319 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MED16Q9Y2X0 877 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SNX5Q9Y5X3 404 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ACTL7AQ9Y615 435 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TACC2O95359 2948 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 DCHS2Q6V1P9 2916 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MDC1Q14676 2089 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ABCA12Q86UK0 2595 aa4.65□□□□□ -1.66
CKS1B-201ENST00000308987 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 A0A0D9SEW6 157 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SPTY2D1-AS1A0A0U1RR47 76 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ILVBLA1L0T0 632 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CPED1A4D0V7 1026 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 OR51F1A6NGY5 319 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LRRC14BA6NHZ5 514 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CLDN25C9JDP6 229 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 G3V2T6 193 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CDC7O00311 574 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 E2F3O00716 465 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 PPP6CO00743 305 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LSM1O15116 133 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GSTA4O15217 222 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RGS14O43566 566 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TPST1O60507 370 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DPM1O60762 260 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 UGT2B11O75310 529 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ERN1O75460 977 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RECQL5O94762 991 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SEC24DO94855 1032 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GABARAPO95166 117 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CD160O95971 181 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SLC4A1P02730 911 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 S100BP04271 92 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GP1BAP07359 652 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 MTHFD1P11586 935 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TSPAN8P19075 237 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CHRM3P20309 590 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 MATN1P21941 496 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CDH3P22223 829 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 HNRNPA2B1P22626 353 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.671e-8■■■■■ 29.3
CKS1B-201ENST00000308987 EEF1B2P24534 225 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 IL12AP29459 219 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NUDT1P36639 197 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 MAGEA2P43356 314 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SERPINB10P48595 397 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 PIK3CGP48736 1102 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CDH4P55283 916 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RPS3AP61247 264 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CSNK2BP67870 215 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TRAF2Q12933 501 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ABRQ12979 859 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 KEAP1Q14145 624 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SEMA3AQ14563 771 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 IHHQ14623 411 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NR1D2Q14995 579 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 OXA1LQ15070 435 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TGIF1Q15583 401 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NEDD8Q15843 81 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RBBP7Q16576 425 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TBR1Q16650 682 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DEFB133Q30KQ1 61 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TTLL9Q3SXZ7 439 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TIGD2Q4W5G0 525 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RUNDC3AQ59EK9 446 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 COLEC12Q5KU26 742 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LYPLAL1Q5VWZ2 237 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RNF219Q5W0B1 726 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TBPL2Q6SJ96 375 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CYP20A1Q6UW02 462 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ISLR2Q6UXK2 745 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LINGO4Q6UY18 593 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF783Q6ZMS7 281 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 Q6ZSR6 202 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 PRSS48Q7RTY5 328 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 KDELC2Q7Z4H8 507 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 IFNEQ86WN2 208 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CALHM3Q86XJ0 350 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LACC1Q8IV20 430 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SLC35F3Q8IY50 421 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 MICU2Q8IYU8 434 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 OFCC1Q8IZS5 231 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RBFAQ8N0V3 343 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NLGN4XQ8N0W4 816 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SPARTQ8N0X7 666 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms