RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ARF3P61204 181 aaPredicted RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 RPS15AP62244 130 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 RGS1Q08116 209 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 FUT5Q11128 374 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 LSAMPQ13449 338 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 SMAD4Q13485 552 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 TDGQ13569 410 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 LEXMQ3ZCV2 418 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 FGD3Q5JSP0 725 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 BROXQ5VW32 411 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 OR4C15Q8NGM1 316 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 GPBAR1Q8TDU6 330 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 C12orf43Q96C57 262 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 TAS2R7Q9NYW3 318 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 SEC14L3Q9UDX4 400 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 WBP11Q9Y2W2 641 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 COL4A2P08572 1712 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 UGT2B11O75310 529 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 GADD45GO95257 159 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 ATE1O95260 518 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 NTN1O95631 604 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 IFNA14P01570 189 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 IFNW1P05000 195 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 SLC35G6P0C7Q6 338 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 SRFP11831 508 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 JUNDP17535 347 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 CSNK2A2P19784 350 aaPredicted RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 CPN2P22792 545 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 POU1F1P28069 291 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 TRA2BP62995 288 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 PIN1Q13526 163 aaPredicted RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 RFX4Q33E94 735 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 GPAT3Q53EU6 434 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
SCG2-201ENST00000305409 KLHL6Q8WZ60 621 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 PIP5K1AQ99755 562 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 IL21RQ9HBE5 538 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 FAM60AQ9NP50 221 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 A4GALTQ9NPC4 353 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 PCDHGA2Q9Y5H1 932 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 ENPP4Q9Y6X5 453 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 CFAP54Q96N23 3096 aa10.73□□□□□ -0.69
SCG2-201ENST00000305409 SOX1O00570 391 aaPredicted RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 TRMUO75648 421 aaKnown RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 INMTO95050 263 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 GASTP01350 101 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 WNT1P04628 370 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 NR2F6P10588 404 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 IL9P15248 144 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 VSX2P58304 361 aaPredicted RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 HHEXQ03014 270 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 KIR2DS3Q14952 304 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 MICAQ29983 383 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 FAM111BQ6SJ93 734 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 CCDC81Q6ZN84 652 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 TSPYL5Q86VY4 417 aaPredicted RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 TAGAPQ8N103 731 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ADAMTS16Q8TE57 1224 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 PROX1Q92786 737 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 SLC22A18Q96BI1 424 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 RNF31Q96EP0 1072 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 KLHDC7BQ96G42 594 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ORAI3Q9BRQ5 295 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 SARGQ9BW04 601 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 RBCK1Q9BYM8 510 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 NDRG4Q9ULP0 352 aaKnown RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 A0A1W2PPC4 97 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 KRBA1A5PL33 1030 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 STK25O00506 426 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ABCB7O75027 752 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 SDC3O75056 442 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 PTNP21246 168 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 RYKP34925 604 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 BUD31P41223 144 aaPredicted RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 XKP51811 444 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 NUDT6P53370 316 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 HOXC5Q00444 222 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 SEC23BQ15437 767 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ZC3H12BQ5HYM0 836 aaKnown RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 TCTN3Q6NUS6 607 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 BORAQ6PGQ7 559 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 KLHL17Q6TDP4 642 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 Q7L0L9 218 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 AQP11Q8NBQ7 271 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 TMEM52Q8NDY8 209 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 NUP43Q8NFH3 380 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ZDHHC1Q8WTX9 485 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 POP5Q969H6 163 aaKnown RBP10.72□□□□□ -0.69
SCG2-201ENST00000305409 GAL3ST3Q96A11 431 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ARSGQ96EG1 525 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 NRBF2Q96F24 287 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ZNF681Q96N22 645 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ALPK1Q96QP1 1244 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
SCG2-201ENST00000305409 LRRC61Q9BV99 259 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms