RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 A0A0A6YYH2 397 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TRIM49BA6NDI0 452 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 A6NJ64 397 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM200CA6NKL6 621 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TCP10L2B9ZVM9 353 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ACOT7O00154 380 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CYR61O00622 381 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TP53I11O14683 189 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 KLF11O14901 512 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 KLF4O43474 513 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TGOLN2O43493 480 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR2J2O76002 312 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 KAT7O95251 611 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 IGHV2-5P01817 119 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NMBP08949 121 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TLE4Q04727 773 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 FSTL1Q12841 308 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 GAMTQ14353 236 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 LARS2Q15031 903 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 EIF4HQ15056 248 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 HNRNPA1L2Q32P51 320 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SCGB2B2Q4G0G5 96 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PTPN20Q4JDL3 420 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NKAIN1Q4KMZ8 207 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RHBDF2Q6PJF5 856 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 BLOC1S3Q6QNY0 202 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 HSDL2Q6YN16 418 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 LDLRAD3Q86YD5 345 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SULF2Q8IWU5 870 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 HDDC3Q8N4P3 179 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CBR4Q8N4T8 237 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RCBTB1Q8NDN9 531 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR6K3Q8NGY3 331 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR5K1Q8NHB7 308 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 P2RX5Q93086 422 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 LGALS12Q96DT0 336 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RAB3CQ96E17 227 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OTUB1Q96FW1 271 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 COQ10AQ96MF6 247 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CNN2Q99439 309 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RBBP8Q99708 897 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SLC30A3Q99726 388 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 HOPXQ9BPY8 73 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SLC29A3Q9BZD2 475 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 GJB4Q9NTQ9 266 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CHRNA9Q9UGM1 479 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF223Q9UK11 482 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 USP3Q9Y6I4 520 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 A0A0D9SFI3 127 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 A0A1W2PRV1 198 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GABRR3A8MPY1 467 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 EPHB6O15197 1021 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 BCAT2O15382 392 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PRODHO43272 600 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ABHD2P08910 425 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 HOXB7P09629 217 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GLRA1P23415 457 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 NDUFS1P28331 727 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SRP9P49458 86 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 COMPP49747 757 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RAB5CP51148 216 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PRKAG1P54619 331 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CD81P60033 236 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PPP2CBP62714 309 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PPP2CAP67775 309 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 OGDHQ02218 1023 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 TGM3Q08188 693 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF252P-AS1Q0IIN9 211 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 NPRL3Q12980 569 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PADI6Q6TGC4 694 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 WDR88Q6ZMY6 472 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GHDCQ8N2G8 530 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF283Q8N7M2 679 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CHST14Q8NCH0 376 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 C3orf49Q96BT1 292 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CCDC126Q96EE4 140 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 DIRC2Q96SL1 478 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 MFRPQ9BY79 579 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RAB34Q9BZG1 259 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ZMAT3Q9HA38 289 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 MKKSQ9NPJ1 570 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 HIF1ANQ9NWT6 349 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SLC17A7Q9P2U7 560 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PARP4Q9UKK3 1724 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GLI3P10071 1580 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 OR14I1A6ND48 311 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 K7EP13 123 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 DPYSL4O14531 572 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SGPL1O95470 568 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ADAP00813 363 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CSF2P04141 144 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CSF1RP07333 972 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF44P15621 663 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 TYMPP19971 482 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 KLRK1P26718 216 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GRK4P32298 578 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms