RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Klhl21Q3U410 597 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 SetmarQ80UJ9 309 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kiaa0895lQ810A5 467 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc25a44Q8BGF9 314 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1297Q8VGE8 312 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp65Q91W94 390 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mrps28Q9CY16 186 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Necab3Q9D6J4 353 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Wdr95D3Z7A8 784 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Agtr1aP29754 359 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pcsk7Q61139 770 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Clec2eQ80XD9 204 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 NfascQ810U3 1240 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fzd10Q8BKG4 582 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Osbpl11Q8CI95 751 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 NrmQ8VC65 262 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hacd2Q9D3B1 254 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mocs2Q9Z223 189 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 SynaQ5G5D5 617 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ostm1Q8BGT0 338 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 SargQ8BI29 606 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 MylipQ8BM54 445 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sumf2Q8BPG6 308 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pcdhac2Q91Y09 1006 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr103Q920Y8 313 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Eral1Q9CZU4 437 aaKnown RBP11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Q9CZV2 255 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Irs2P81122 1321 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Znf518bB2RRE4 1077 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm3633L7N233 213 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm9611L7N476 213 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Stc1O55183 247 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sim1Q61045 765 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Inpp5kQ8C5L6 468 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc35e2Q8C811 405 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 GmdsQ8K0C9 372 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pld3O35405 488 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ubl4aP21126 157 aaKnown RBP11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gabarapl2P60521 117 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sox19Q62249 55 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tvp23aQ6NVH0 222 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Stk35Q80ZW0 539 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cpped1Q8BFS6 312 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hspa12aQ8K0U4 675 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tram1l1Q8QZR0 363 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vsx1Q91V10 363 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fam3bQ9D309 235 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gng13Q9JMF3 67 aa11.48□□□□□ -0.57
Trim56-201ENSMUST00000054384 9230113P08RikD3YWX3 137 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tnfrsf11aO35305 625 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Syn1O88935 706 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Il3P01586 166 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dnajc15Q78YY6 149 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pced1bQ8BGX1 433 aaKnown RBP11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1309Q8VF83 320 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Arhgap39P59281 1107 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ostf1Q62422 215 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 LsampQ8BLK3 341 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Polr2hQ923G2 150 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm43796A0A0J9YV32 372 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm10717D3Z1I8 228 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr557E9Q550 322 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kcnc1P15388 511 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rab11bP46638 218 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Yy2Q3TTC2 378 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Wnt8aQ64527 354 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 ToxQ66JW3 526 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Itln1bQ80ZA0 313 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ptges2Q8BWM0 384 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 EloaQ8CB77 773 aaKnown RBP11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 PvrQ8K094 408 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rtn4ip1Q924D0 396 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fbxo36Q9CQ24 188 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lingo1Q9D1T0 614 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ccr10Q9JL21 362 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfc3h1B2RT41 1992 aaKnown RBP11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn2r116E9Q6I0 856 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 A4galtQ67BJ4 359 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 ToporsQ80Z37 1033 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 SgtbQ8VD33 304 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Npffr2Q924H0 417 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Clic3Q9D7P7 237 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cypt12Q9DAR6 119 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Herpud2Q9JJC9 404 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nfat5Q9WV30 1534 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Akap11E9Q777 1895 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 SptbP15508 2128 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr420E9Q4G0 321 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cx3cl1O35188 395 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pag1Q3U1F9 429 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 ZyxQ62523 564 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rgs7bpQ8BQP9 257 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 March8Q9DBD2 286 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tcrg-C4A0A075B6C7 190 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm28710A0A1B0GR31 962 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm12789B1AUV7 164 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 FgaE9PV24 789 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm4847G3X946 537 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Bcl2l11O54918 196 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ldb2O55203 373 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 97.5 ms