RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Spg21Q9CQC8 308 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Khdc3Q9CWU5 440 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zfp383A0A087WRR7 490 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr288E9Q1P2 318 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm10338K7N692 204 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cdc6O89033 562 aaKnown RBP15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pou3f2P31360 445 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cdc42P60766 191 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fbxo40P62932 710 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Barhl1P63157 327 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Entpd7Q3TCT4 606 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Stox2Q499E5 926 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Atp11bQ6DFW5 1175 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cops8Q8VBV7 209 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Spred1Q924S8 444 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ift22Q9DAI2 185 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Plekhb1Q9QYE9 243 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mfsd13bA0A1L1SUA2 455 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Nkx1-1G3UXB3 402 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 5730507C01RikJ3QPX0 416 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm8926L7MUE8 181 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr209L7N1X3 305 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc10a1O08705 362 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 AcrP23578 436 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Lad1P57016 528 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm5113Q3UGK8 141 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc29a2Q61672 456 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Elavl4Q61701 385 aaKnown RBP15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dppa4Q8CCG4 296 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pcdhac1Q91Y10 964 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cd302Q9DCG2 228 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tnfrsf21Q9EPU5 655 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Adamts5Q9R001 930 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Aloxe3Q9WV07 711 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Atp6ap1lD3Z5W0 336 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 H2-T24F8VQG4 363 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ccl26F8VQM2 93 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ephb6O08644 1014 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 H2-K1P01901 369 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ctla2bP12400 113 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cfl2P45591 166 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tbpl1P62340 186 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 SgcgP82348 291 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 InhaQ04997 366 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dennd1bQ3U1T9 766 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tex10Q3URQ0 928 aaKnown RBP15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Spag8Q3V0Q6 470 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Irf4Q64287 450 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dpp10Q6NXK7 797 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr594Q7TRR4 311 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Lamp3Q7TST5 411 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Nipal3Q8BGN5 410 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cnksr3Q8BMA3 555 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bnc2Q8BMQ3 1127 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Atat1Q8K341 421 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Vmn1r185Q8R299 319 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ccdc71Q8VEG0 433 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 FopnlQ9CZS3 174 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bloc1s6Q9R0C0 172 aa15.45■□□□□ 0.06
Trim28-201ENSMUST00000005705 Trgv2A2J008 116 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm11397F6V5V4 377 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Chst3O88199 472 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 JtbO88824 146 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Hoxd8P23463 289 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 DcnP28654 354 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cpt1aP97742 773 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rplp2P99027 115 aaKnown RBP15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bcl2a1cQ0P538 128 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Foxr1Q3UTB7 268 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Arhgef9Q3UTH8 516 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cldn34b4Q3V0X2 211 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr845Q7TRG2 312 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr384Q7TRX8 312 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Peli2Q8BST6 419 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mnd1Q8K396 205 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bloc1s5Q8R015 185 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ptcd2Q8R3K3 381 aaKnown RBP15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr77Q8VEY9 312 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Serpinb9gQ8VHQ1 377 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fads2Q9Z0R9 444 aaKnown RBP15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fkbp1bQ9Z2I2 108 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 SvilQ8K4L3 2170 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 DmdP11531 3678 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Btnl6A2CG22 539 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Lrpap1P55302 360 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc26a10Q5EBI0 492 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Adam2Q60718 735 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tas2r140Q7TQA4 312 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp184Q7TSH9 737 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 H2afjQ8R1M2 129 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Stx19Q8R1Q0 292 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Vmn1r219Q8R271 312 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 NifkQ91VE6 317 aaKnown RBP15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ash2lQ91X20 623 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tmem179bQ9CY24 219 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rhox2dW4VSN9 191 aa15.44■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ralgps1A2AR50 585 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 8030474K03RikE9Q4Y8 554 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp846G3X996 541 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Vmn2r95L7N274 845 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms