RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm16432A0A0A6YXX9 775 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Trbv20A0A0B4J1H5 111 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Slfn3A0A1L1STQ7 640 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cd300ld4A2A7W1 245 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ndor1A2AI05 598 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Il20rbE9Q9A6 308 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Asna1O54984 348 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Fgf18O89101 207 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Zp2P20239 713 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Slc16a3P57787 470 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Inpp5jP59644 1003 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 SnrpgP62309 76 aaKnown RBP17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Prelid2Q0VBB0 177 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tmem253Q3UNB8 204 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Snx6Q6P8X1 406 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cd300ld3Q6SJQ5 245 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Psmd11Q8BG32 422 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Enpp6Q8BGN3 440 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cmtr2Q8BWQ4 767 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 PxkQ8BX57 582 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Kiaa2013Q91X21 634 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Uck2Q99PM9 261 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ube2fQ9CY34 185 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Slc22a17Q9D9E0 401 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tm9sf3Q9ET30 587 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Kcnj10Q9JM63 379 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Hapln1Q9QUP5 356 aaKnown RBP17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sema4gQ9WUH7 837 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tex264E9Q137 309 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gm16506F7ANP4 213 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Vmn1r16K7N775 303 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr1249L7MU51 318 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Serpinb9eO08806 377 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 P04214 136 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ube2e3P52483 207 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Adamts19P59509 1210 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Drd2P61168 444 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Rab33aP97950 237 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Xkr9Q5GH62 373 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Crhr2Q60748 411 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tas2r13Q7M720 305 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr384Q7TRX8 312 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 CptpQ8BS40 216 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 PigzQ8BTP0 560 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Fbxl22Q8C7B6 236 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gulp1Q8K2A1 304 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Atat1Q8K341 421 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 FbrsQ8R089 466 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Blzf1Q8R2X8 403 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Zfyve21Q8VCM3 234 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Hspa14Q99M31 509 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Slc26a5Q99NH7 744 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gtf2e2Q9D902 292 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Psmg2Q9EST4 264 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Plekhb1Q9QYE9 243 aa17.82■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Rp1l1Q8CGM2 1859 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Mamdc4A2AJA7 1228 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gm5478D3Z6R0 159 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 IlkO55222 452 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 P01667 111 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 FurinP23188 793 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 HccsP53702 272 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cdh26P59862 763 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sox14Q04892 240 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gpr165Q3V3A3 455 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Klhl23Q6GQU2 558 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr728Q7TRM6 311 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Arl15Q8BGR6 204 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tbl3Q8C4J7 801 aaKnown RBP17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Q8R3C1 574 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cd209aQ91ZX1 238 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Prmt3Q922H1 532 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Nkd1Q99MH6 471 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Dppa5aQ9CQS7 118 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 3300002I08RikQ9CXH3 147 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Creb3l4Q9D2A5 370 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tyk2Q9R117 1184 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gm5072A2AHM1 344 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Zfp934K7N6H3 473 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gm17174M0QWQ9 212 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 OsmrO70458 971 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Mtnd5P03921 607 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 CatP24270 527 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Fmo1P50285 532 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Polr1cP52432 346 aaKnown RBP17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sox3P53784 375 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Hsd17b3P70385 305 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 JupQ02257 745 aaKnown RBP17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 CtsoQ8BM88 312 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gprin3Q8BWS5 763 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Lcmt2Q8BYR1 686 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Q8C0X8 640 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Acat2Q8CAY6 397 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Abcg4Q91WA9 646 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Rnf144aQ925F3 292 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tcf19Q99KJ5 263 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cadm3Q99N28 396 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ttc9bQ9D6E4 239 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cbll1Q9JIY2 491 aa17.81■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Mapk11Q9WUI1 364 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms