RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeast

Gene UTP23, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP23	YOR004W	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
UTP23	YOR004W	BUD21	Q08492	214 aa	Predicted RBP	4.91	□□□□□ -1.62
UTP23	YOR004W	CDC34	P14682	295 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	CMP2	P14747	604 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	LYP1	P32487	611 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	DUT1	P33317	147 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	FPR3	P38911	411 aa	Known RBP	4.9	□□□□□ -1.63
UTP23	YOR004W	MXR1	P40029	184 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	YRB30	P53107	440 aa	Predicted RBP	4.9	□□□□□ -1.63
UTP23	YOR004W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
UTP23	YOR004W	CLU1	Q03690	1277 aa	Known RBP	4.9	□□□□□ -1.63
UTP23	YOR004W	IOC4	Q04213	475 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	PDS5	Q04264	1277 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	ATG13	Q06628	738 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	CDC45	Q08032	650 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	YOR093C	Q12275	1648 aa		4.9	□□□□□ -1.63
UTP23	YOR004W	TRP2	P00899	507 aa	Known RBP	4.89	□□□□□ -1.63
UTP23	YOR004W	GAL10	P04397	699 aa		4.89	□□□□□ -1.63
UTP23	YOR004W	RPL11A	P0C0W9	174 aa	Known RBP	4.89	□□□□□ -1.63
UTP23	YOR004W	MNR2	P35724	969 aa		4.89	□□□□□ -1.63
UTP23	YOR004W	OPY1	P38271	328 aa		4.89	□□□□□ -1.63
UTP23	YOR004W	VPS27	P40343	622 aa	Known RBP	4.89	□□□□□ -1.63
UTP23	YOR004W	PLB2	Q03674	706 aa		4.89	□□□□□ -1.63
UTP23	YOR004W	ACM1	Q08981	209 aa		4.89	□□□□□ -1.63
UTP23	YOR004W	RPL11B	Q3E757	174 aa	Predicted RBP	4.89	□□□□□ -1.63
UTP23	YOR004W	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	APL1	P27351	700 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	UGA2	P38067	497 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	GEM1	P39722	662 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	TCB2	P48231	1178 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	EEB1	Q02891	456 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
UTP23	YOR004W	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
UTP23	YOR004W	SPP382	Q06411	708 aa	Predicted RBP	4.88	□□□□□ -1.63
UTP23	YOR004W	RIB2	Q12362	591 aa	Known RBP	4.88	□□□□□ -1.63
UTP23	YOR004W	DBP2	P24783	546 aa	Known RBP	4.87	□□□□□ -1.63
UTP23	YOR004W	DOM34	P33309	386 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	PNT1	P38969	423 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	MET10	P39692	1035 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	YIR014W	P40570	242 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	TYW3	P53177	273 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	PBP1	P53297	722 aa	Known RBP	4.87	□□□□□ -1.63
UTP23	YOR004W	SIZ1	Q04195	904 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
UTP23	YOR004W	RAV1	P47104	1357 aa		4.87	□□□□□ -1.63
UTP23	YOR004W	THS1	P04801	734 aa	Known RBP	4.86	□□□□□ -1.63
UTP23	YOR004W	INO1	P11986	533 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	ACE2	P21192	770 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	SLA2	P33338	968 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	TAT2	P38967	592 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	SNF7	P39929	240 aa	Known RBP	4.86	□□□□□ -1.63
UTP23	YOR004W	RRT14	P40470	206 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	RXT3	Q07458	294 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	RKM4	Q12504	494 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	RTC1	Q08281	1341 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	LTE1	P07866	1435 aa		4.86	□□□□□ -1.63
UTP23	YOR004W	BI4	P03879	638 aa		4.85	□□□□□ -1.63
UTP23	YOR004W	MOT2	P34909	587 aa	Known RBP	4.85	□□□□□ -1.63
UTP23	YOR004W	SHM2	P37291	469 aa	Known RBP	4.85	□□□□□ -1.63
UTP23	YOR004W	YFR016C	P43597	1233 aa	Known RBP	4.85	□□□□□ -1.63
UTP23	YOR004W	YSP2	Q06681	1438 aa		4.85	□□□□□ -1.63
UTP23	YOR004W	RPA190	P10964	1664 aa	Known RBP	4.85	□□□□□ -1.63
UTP23	YOR004W	CHC1	P22137	1653 aa	Known RBP	4.84	□□□□□ -1.63
UTP23	YOR004W	CTS1	P29029	562 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	YKL107W	P34251	309 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
UTP23	YOR004W	YGL176C	P46945	554 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	MSC2	Q03455	724 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	SPO20	Q04359	397 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	ACK1	Q07622	623 aa	Predicted RBP	4.84	□□□□□ -1.63
UTP23	YOR004W	GPB1	Q08886	897 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	YPL066W	Q12194	479 aa		4.84	□□□□□ -1.63
UTP23	YOR004W	NUP157	P40064	1391 aa	Known RBP	4.83	□□□□□ -1.64
UTP23	YOR004W	CDC20	P26309	610 aa		4.83	□□□□□ -1.64
UTP23	YOR004W	ESL2	P36168	1195 aa		4.83	□□□□□ -1.64
UTP23	YOR004W	ORC1	P54784	914 aa	Predicted RBP	4.83	□□□□□ -1.64
UTP23	YOR004W	CDC6	P09119	513 aa		4.82	□□□□□ -1.64
UTP23	YOR004W	HFM1	P51979	1187 aa		4.82	□□□□□ -1.64
UTP23	YOR004W	YGR053C	P53234	283 aa		4.82	□□□□□ -1.64
UTP23	YOR004W	GTF1	P53260	183 aa	Predicted RBP	4.82	□□□□□ -1.64
UTP23	YOR004W	GSF2	Q04697	403 aa	Known RBP	4.82	□□□□□ -1.64
UTP23	YOR004W	YLR225C	Q05948	407 aa	Known RBP	4.82	□□□□□ -1.64
UTP23	YOR004W	RVB2	Q12464	471 aa	Known RBP	4.82	□□□□□ -1.64
UTP23	YOR004W	SPO14	P36126	1683 aa		4.82	□□□□□ -1.64
UTP23	YOR004W	SIP5	P40210	489 aa	Known RBP	4.81	□□□□□ -1.64
UTP23	YOR004W	BUD3	P25558	1636 aa		4.81	□□□□□ -1.64
UTP23	YOR004W	DNF2	Q12675	1612 aa		4.81	□□□□□ -1.64
UTP23	YOR004W	CLN2	P20438	545 aa		4.8	□□□□□ -1.64
UTP23	YOR004W	ROX1	P25042	368 aa		4.8	□□□□□ -1.64
UTP23	YOR004W	NAP1	P25293	417 aa	Known RBP	4.8	□□□□□ -1.64
UTP23	YOR004W	KRI1	P42846	591 aa	Known RBP	4.8	□□□□□ -1.64
UTP23	YOR004W	FAA4	P47912	694 aa	Known RBP	4.8	□□□□□ -1.64
UTP23	YOR004W	MTC3	P53077	123 aa		4.8	□□□□□ -1.64
UTP23	YOR004W	VPS62	P53285	467 aa		4.8	□□□□□ -1.64
UTP23	YOR004W	TUB2	P02557	457 aa	Known RBP	4.79	□□□□□ -1.64
UTP23	YOR004W	STE11	P23561	717 aa		4.79	□□□□□ -1.64
UTP23	YOR004W	EMC1	P25574	760 aa		4.79	□□□□□ -1.64
UTP23	YOR004W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
UTP23	YOR004W	LST4	P34239	828 aa		4.79	□□□□□ -1.64
UTP23	YOR004W	TAF5	P38129	798 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms