RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	MAL31	P38156	614 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	GPD2	P41911	440 aa	Known RBP	7.6	□□□□□ -1.19
MSB3	YNL293W	MIC19	P43594	170 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	YNL144C	P53907	740 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	UFD2	P54860	961 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	VTI1	Q04338	217 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	YMR018W	Q04364	514 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	YDL121C	Q07541	149 aa		7.6	□□□□□ -1.19
MSB3	YNL293W	RRP6	Q12149	733 aa	Known RBP	7.6	□□□□□ -1.19
MSB3	YNL293W	SSB1	P11484	613 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	HNM1	P19807	563 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	PGM2	P37012	569 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	PSY4	P38193	441 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	PEX18	P38855	283 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	HXT6	P39003	570 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	HXT7	P39004	570 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	RTT105	P40063	208 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	SSB2	P40150	613 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	RIC1	P40395	1056 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	GTR1	Q00582	310 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	TAF12	Q03761	539 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	SPC24	Q04477	213 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	TMA64	Q04600	565 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	SVF1	Q05515	481 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	CDC53	Q12018	815 aa	Known RBP	7.59	□□□□□ -1.19
MSB3	YNL293W	APL4	Q12028	832 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	VIK1	Q12045	647 aa		7.59	□□□□□ -1.19
MSB3	YNL293W	TRM1	P15565	570 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	VMA4	P22203	233 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	UBA1	P22515	1024 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	MET1	P36150	593 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	MRX3	P38172	270 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	SMC2	P38989	1170 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	MDM1	Q01846	1127 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	TOM70	P07213	617 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	PRP6	P19735	899 aa	Predicted RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	MBR1	P23493	339 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	YKL091C	P33324	310 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	SPP381	P38282	291 aa	Predicted RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	AXL1	P40851	1208 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	YFL066C	P43538	392 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	HFM1	P51979	1187 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	YNL108C	P53929	270 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	RMD1	Q03441	430 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	YML082W	Q04533	649 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	DBP9	Q06218	594 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	MCM21	Q06675	368 aa		7.58	□□□□□ -1.2
MSB3	YNL293W	MAK21	Q12176	1025 aa	Known RBP	7.58	□□□□□ -1.2
MSB3	YNL293W	GCN3	P14741	305 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	CLB3	P24870	427 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	KIP1	P28742	1111 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	PTC4	P38089	393 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	TAF5	P38129	798 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	PMC1	P38929	1173 aa	Predicted RBP	7.57	□□□□□ -1.2
MSB3	YNL293W	MKT1	P40850	830 aa	Known RBP	7.57	□□□□□ -1.2
MSB3	YNL293W	BBC1	P47068	1157 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	HXT17	P53631	564 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	FDC1	Q03034	503 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	VPS36	Q06696	566 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	NOP6	Q07623	225 aa	Known RBP	7.57	□□□□□ -1.2
MSB3	YNL293W	BNR1	P40450	1375 aa		7.57	□□□□□ -1.2
MSB3	YNL293W	JNM1	P36224	373 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	RPN10	P38886	268 aa	Known RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	MBP1	P39678	833 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	SNL1	P40548	159 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	GNP1	P48813	663 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	COX20	Q04935	205 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	ATG38	Q05789	226 aa	Known RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	COA4	Q05809	96 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	UBX5	Q06682	500 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	NOB1	Q08444	459 aa	Known RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	SNF2	P22082	1703 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	CDC25	P04821	1589 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	ENO2	P00925	437 aa	Known RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	SCJ1	P25303	377 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	ITR1	P30605	584 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	DYS1	P38791	387 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	ULP2	P40537	1034 aa	Predicted RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	MNT3	P40549	630 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	TFG2	P41896	400 aa	Predicted RBP	7.56	□□□□□ -1.2
MSB3	YNL293W	RPN4	Q03465	531 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	SEC10	Q06245	871 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	GIC2	Q06648	383 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	NSE1	Q07913	336 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	UIP4	Q08926	304 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	SNT2	P53127	1403 aa		7.56	□□□□□ -1.2
MSB3	YNL293W	LAM4	P38800	1345 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	ILS1	P09436	1072 aa	Known RBP	7.55	□□□□□ -1.2
MSB3	YNL293W	DAP2	P18962	818 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	CNA1	P23287	553 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	PEX1	P24004	1043 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	DPB2	P24482	689 aa	Predicted RBP	7.55	□□□□□ -1.2
MSB3	YNL293W	XRS2	P33301	854 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	GEM1	P39722	662 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	PEX14	P53112	341 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	WAR1	Q03631	944 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	EMI2	Q04409	500 aa	Known RBP	7.55	□□□□□ -1.2
MSB3	YNL293W	RTP1	Q12751	981 aa		7.55	□□□□□ -1.2
MSB3	YNL293W	ENO1	P00924	437 aa	Known RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	DSF1	P0CX08	502 aa		7.54	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms