RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C SEC5P89102 971 aa12.88□□□□□ -0.35
YKR040CYKR040C IES4Q08561 116 aa12.88□□□□□ -0.35
YKR040CYKR040C RPC53P25441 422 aa12.87□□□□□ -0.35
YKR040CYKR040C HIR1P32479 840 aa12.87□□□□□ -0.35
YKR040CYKR040C TMT1P32643 299 aa12.87□□□□□ -0.35
YKR040CYKR040C VPS35P34110 944 aa12.87□□□□□ -0.35
YKR040CYKR040C VPS24P36095 224 aaKnown RBP12.87□□□□□ -0.35
YKR040CYKR040C PPS1P38148 807 aa12.87□□□□□ -0.35
YKR040CYKR040C MCM6P53091 1017 aaKnown RBP12.87□□□□□ -0.35
YKR040CYKR040C CAF130P53280 1122 aaPredicted RBP12.87□□□□□ -0.35
YKR040CYKR040C TOF1P53840 1238 aa12.87□□□□□ -0.35
YKR040CYKR040C RIF1P29539 1916 aa12.87□□□□□ -0.35
YKR040CYKR040C DPH2P32461 534 aa12.86□□□□□ -0.35
YKR040CYKR040C BUD2P33314 1104 aa12.86□□□□□ -0.35
YKR040CYKR040C UBP13P38187 747 aa12.86□□□□□ -0.35
YKR040CYKR040C GCV2P49095 1034 aa12.86□□□□□ -0.35
YKR040CYKR040C MAG2Q06436 670 aaKnown RBP12.86□□□□□ -0.35
YKR040CYKR040C UBR2Q07963 1872 aa12.86□□□□□ -0.35
YKR040CYKR040C NAM7P30771 971 aaKnown RBP12.85□□□□□ -0.35
YKR040CYKR040C ELM1P32801 640 aa12.85□□□□□ -0.35
YKR040CYKR040C CCT5P40413 562 aaKnown RBP12.85□□□□□ -0.35
YKR040CYKR040C YNL146WP53906 100 aa12.85□□□□□ -0.35
YKR040CYKR040C SKY1Q03656 742 aa12.85□□□□□ -0.35
YKR040CYKR040C YFL034WP43564 1073 aa12.84□□□□□ -0.35
YKR040CYKR040C YNL134CP53912 376 aaKnown RBP12.84□□□□□ -0.35
YKR040CYKR040C YDR090CQ03193 310 aa12.84□□□□□ -0.35
YKR040CYKR040C YDL057WQ07379 328 aa12.84□□□□□ -0.35
YKR040CYKR040C PCD1Q12524 340 aa12.84□□□□□ -0.35
YKR040CYKR040C DDP1Q99321 188 aaKnown RBP12.84□□□□□ -0.35
YKR040CYKR040C PCK1P10963 549 aa12.83□□□□□ -0.36
YKR040CYKR040C ADE2P21264 571 aaKnown RBP12.83□□□□□ -0.36
YKR040CYKR040C YSC83P32792 385 aa12.83□□□□□ -0.36
YKR040CYKR040C UBX7P38349 436 aa12.83□□□□□ -0.36
YKR040CYKR040C CUR1Q06469 252 aa12.83□□□□□ -0.36
YKR040CYKR040C YPL277CQ08989 487 aa12.83□□□□□ -0.36
YKR040CYKR040C YKT6P36015 200 aaKnown RBP12.82□□□□□ -0.36
YKR040CYKR040C CUL3P53202 744 aa12.82□□□□□ -0.36
YKR040CYKR040C TAM41P53230 385 aa12.82□□□□□ -0.36
YKR040CYKR040C DOT1Q04089 582 aaKnown RBP12.82□□□□□ -0.36
YKR040CYKR040C TLG2Q08144 397 aa12.82□□□□□ -0.36
YKR040CYKR040C TIF1P10081 395 aaKnown RBP12.81□□□□□ -0.36
YKR040CYKR040C SSD1P24276 1250 aaKnown RBP RIP-Chip data12.81□□□□□ -0.36not detected
YKR040CYKR040C SAC6P32599 642 aaKnown RBP12.81□□□□□ -0.36
YKR040CYKR040C MNN4P36044 1178 aa12.81□□□□□ -0.36
YKR040CYKR040C YAP1801P38856 637 aa12.81□□□□□ -0.36
YKR040CYKR040C LAM5P43560 674 aa12.81□□□□□ -0.36
YKR040CYKR040C ALT2P52892 507 aa12.81□□□□□ -0.36
YKR040CYKR040C MNP1P53163 194 aaPredicted RBP12.81□□□□□ -0.36
YKR040CYKR040C ECM7Q06200 448 aa12.81□□□□□ -0.36
YKR040CYKR040C RPL22AP05749 121 aaKnown RBP12.8□□□□□ -0.36
YKR040CYKR040C KEX1P09620 729 aa12.8□□□□□ -0.36
YKR040CYKR040C DAL7P21826 554 aa12.8□□□□□ -0.36
YKR040CYKR040C VID24P38263 362 aa12.8□□□□□ -0.36
YKR040CYKR040C SLX1P38324 304 aa12.8□□□□□ -0.36
YKR040CYKR040C YHL026CP38740 315 aa12.8□□□□□ -0.36
YKR040CYKR040C YPT11P48559 417 aa12.8□□□□□ -0.36
YKR040CYKR040C VTC3Q02725 835 aa12.8□□□□□ -0.36
YKR040CYKR040C EMI2Q04409 500 aaKnown RBP12.8□□□□□ -0.36
YKR040CYKR040C APC11Q12157 165 aa12.8□□□□□ -0.36
YKR040CYKR040C MSD1P15179 658 aaKnown RBP12.79□□□□□ -0.36
YKR040CYKR040C SKG6P32900 734 aaPredicted RBP12.79□□□□□ -0.36
YKR040CYKR040C MRX3P38172 270 aa12.79□□□□□ -0.36
YKR040CYKR040C OPT1P40897 799 aa12.79□□□□□ -0.36
YKR040CYKR040C CIR1P42940 261 aa12.79□□□□□ -0.36
YKR040CYKR040C ENV11P53246 860 aa12.79□□□□□ -0.36
YKR040CYKR040C VMS1Q04311 632 aaKnown RBP12.79□□□□□ -0.36
YKR040CYKR040C YLR455WQ06188 304 aa12.79□□□□□ -0.36
YKR040CYKR040C ADE4P04046 510 aaKnown RBP12.78□□□□□ -0.36
YKR040CYKR040C GPA1P08539 472 aa12.78□□□□□ -0.36
YKR040CYKR040C PHO8P11491 566 aa12.78□□□□□ -0.36
YKR040CYKR040C GLN3P18494 730 aa12.78□□□□□ -0.36
YKR040CYKR040C YEL1P34225 687 aa12.78□□□□□ -0.36
YKR040CYKR040C SNF7P39929 240 aaKnown RBP12.78□□□□□ -0.36
YKR040CYKR040C YER130CP39959 443 aa12.78□□□□□ -0.36
YKR040CYKR040C CCM1P48237 864 aaPredicted RBP12.78□□□□□ -0.36
YKR040CYKR040C NBP1P52919 319 aaPredicted RBP12.78□□□□□ -0.36
YKR040CYKR040C SHE10P53075 577 aa12.78□□□□□ -0.36
YKR040CYKR040C ETT1Q08421 412 aaKnown RBP12.78□□□□□ -0.36
YKR040CYKR040C ZPS1Q12512 249 aa12.78□□□□□ -0.36
YKR040CYKR040C MRF1P30775 413 aaPredicted RBP12.77□□□□□ -0.37
YKR040CYKR040C ESL1P40456 1118 aa12.77□□□□□ -0.37
YKR040CYKR040C DJP1P40564 432 aa12.77□□□□□ -0.37
YKR040CYKR040C VID30P53076 958 aa12.77□□□□□ -0.37
YKR040CYKR040C TRS130Q03660 1102 aa12.77□□□□□ -0.37
YKR040CYKR040C SPT2P06843 333 aaPredicted RBP12.76□□□□□ -0.37
YKR040CYKR040C TOM70P07213 617 aaKnown RBP12.76□□□□□ -0.37
YKR040CYKR040C YKL091CP33324 310 aaKnown RBP12.76□□□□□ -0.37
YKR040CYKR040C BUD16P39988 312 aa12.76□□□□□ -0.37
YKR040CYKR040C BIM1P40013 344 aa12.76□□□□□ -0.37
YKR040CYKR040C FMP10P40098 244 aa12.76□□□□□ -0.37
YKR040CYKR040C HUL4P40985 892 aa12.76□□□□□ -0.37
YKR040CYKR040C HAP5Q02516 242 aa12.76□□□□□ -0.37
YKR040CYKR040C YPR117WQ06116 2489 aa12.76□□□□□ -0.37
YKR040CYKR040C COX4P04037 155 aa12.75□□□□□ -0.37
YKR040CYKR040C IDI1P15496 288 aa12.75□□□□□ -0.37
YKR040CYKR040C CSE2P33308 149 aa12.75□□□□□ -0.37
YKR040CYKR040C APN2P38207 520 aa12.75□□□□□ -0.37
YKR040CYKR040C SCD6P45978 349 aaKnown RBP RIP-Chip data12.75□□□□□ -0.37not detected
YKR040CYKR040C ISM1P48526 1002 aa12.75□□□□□ -0.37
YKR040CYKR040C ORC5P50874 479 aa12.75□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms