RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 DHX37Q8IY37 1157 aaKnown RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 TTC5Q8N0Z6 440 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 LAMB2P55268 1798 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 USP42Q9H9J4 1324 aaKnown RBP7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 AK7Q96M32 723 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 ZBTB1Q9Y2K1 713 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 GNPATO15228 680 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 HOXB7P09629 217 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 WDR63Q8IWG1 891 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 COL11A2P13942 1736 aaPredicted RBP7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 IL6STP40189 918 aaPredicted RBP7.48□□□□□ -1.21
PRICKLE1-220ENST00000640840 GYS1P13807 737 aa7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 C10orf71Q711Q0 1435 aa7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 TRMT2AQ8IZ69 625 aaKnown RBP7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 RTCBQ9Y3I0 505 aaKnown RBP7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 ARFGEF1Q9Y6D6 1849 aa7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 TM4SF1P30408 202 aa7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 SPINK5Q9NQ38 1064 aaPredicted RBP7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 TSPYL4Q9UJ04 414 aa7.47□□□□□ -1.21
PRICKLE1-220ENST00000640840 STARD3NLO95772 234 aa7.46□□□□□ -1.21
PRICKLE1-220ENST00000640840 TRAPPC3LQ5T215 181 aa7.46□□□□□ -1.21
PRICKLE1-220ENST00000640840 SPON1Q9HCB6 807 aa7.46□□□□□ -1.21
PRICKLE1-220ENST00000640840 NARFQ9UHQ1 456 aa7.46□□□□□ -1.21
PRICKLE1-220ENST00000640840 DDX60Q8IY21 1712 aaKnown RBP7.46□□□□□ -1.22
PRICKLE1-220ENST00000640840 ZBTB7AO95365 584 aa7.46□□□□□ -1.22
PRICKLE1-220ENST00000640840 CALD1Q05682 793 aaKnown RBP7.46□□□□□ -1.22
PRICKLE1-220ENST00000640840 TNRC6CQ9HCJ0 1690 aaKnown RBP7.46□□□□□ -1.22
PRICKLE1-220ENST00000640840 CAMTA2O94983 1202 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 A1BGP04217 495 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 GNAI1P63096 354 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 EXOC6Q8TAG9 804 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 ATP10DQ9P241 1426 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 KRT24Q2M2I5 525 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 RRAGDQ9NQL2 400 aaPredicted RBP7.45□□□□□ -1.22
PRICKLE1-220ENST00000640840 FRAT2O75474 233 aaPredicted RBP7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 PXDNLA1KZ92 1463 aa7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 PHF14O94880 888 aa7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 C8orf58Q8NAV2 365 aa7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 SRP68Q9UHB9 627 aaKnown RBP7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
PRICKLE1-220ENST00000640840 A0A087WZG4 1122 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 POLRMTO00411 1230 aaKnown RBP7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 DDR1Q08345 913 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 ATF5Q9Y2D1 282 aaPredicted RBP7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 UTRNP46939 3433 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 PROSER3Q2NL68 480 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 IBTKQ9P2D0 1353 aaPredicted RBP7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 USPL1Q5W0Q7 1092 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 NLGN1Q8N2Q7 840 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 TSPYL6Q8N831 410 aa7.43□□□□□ -1.22
PRICKLE1-220ENST00000640840 ERVV-1B6SEH8 477 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 CLEC4GQ6UXB4 293 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 CANXP27824 592 aaKnown RBP7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 RFC4P35249 363 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 DUSP27Q5VZP5 1158 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 TSR2Q969E8 191 aaKnown RBP7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 RNF123Q5XPI4 1314 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 SLFN5Q08AF3 891 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 FAM43AQ8N2R8 423 aa7.42□□□□□ -1.22
PRICKLE1-220ENST00000640840 PIP4K2AP48426 406 aaPredicted RBP7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 MAP3K15Q6ZN16 1313 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 VAMP4O75379 141 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 NFIXQ14938 502 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 TBC1D9BQ66K14 1250 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 LRRC37AA6NMS7 1700 aa7.41□□□□□ -1.22
PRICKLE1-220ENST00000640840 CARMIL3Q8ND23 1372 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 CACNA1SQ13698 1873 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 MMP10P09238 476 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 HLFQ16534 295 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 DZIP3Q86Y13 1208 aaKnown RBP7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 FHDC1Q9C0D6 1143 aaPredicted RBP7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 CHPF2Q9P2E5 772 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 KCNA3P22001 575 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 TTLL7Q6ZT98 887 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 ZNF34Q8IZ26 560 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 SYT17Q9BSW7 474 aa7.4□□□□□ -1.22
PRICKLE1-220ENST00000640840 MYH3P11055 1940 aa7.4□□□□□ -1.23
PRICKLE1-220ENST00000640840 FER1L6Q2WGJ9 1857 aa7.4□□□□□ -1.23
PRICKLE1-220ENST00000640840 KLRG2A4D1S0 409 aaPredicted RBP7.4□□□□□ -1.23
PRICKLE1-220ENST00000640840 TCERG1O14776 1098 aaKnown RBP7.4□□□□□ -1.23
PRICKLE1-220ENST00000640840 DBF4Q9UBU7 674 aaPredicted RBP7.4□□□□□ -1.23
PRICKLE1-220ENST00000640840 LTBP1Q14766 1721 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 UBN2Q6ZU65 1347 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 ZPR1O75312 459 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 POLD1P28340 1107 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 TBC1D2BQ9UPU7 963 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 CHD4Q14839 1912 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 SBF1O95248 1867 aa7.39□□□□□ -1.23
PRICKLE1-220ENST00000640840 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms