RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 PRR5LQ6MZQ0 368 aa18.18■□□□□ 0.5
RTTN-221ENST00000640736 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
RTTN-221ENST00000640736 H0YIN7 160 aa18.17■□□□□ 0.5
RTTN-221ENST00000640736 DSG3P32926 999 aa18.17■□□□□ 0.5
RTTN-221ENST00000640736 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
RTTN-221ENST00000640736 SBF1O95248 1867 aa18.17■□□□□ 0.5
RTTN-221ENST00000640736 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
RTTN-221ENST00000640736 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
RTTN-221ENST00000640736 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
RTTN-221ENST00000640736 CNBD1Q8NA66 436 aa18.16■□□□□ 0.5
RTTN-221ENST00000640736 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
RTTN-221ENST00000640736 CACNA1SQ13698 1873 aa18.16■□□□□ 0.5
RTTN-221ENST00000640736 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 TTLL6Q8N841 843 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
RTTN-221ENST00000640736 PDE6BP35913 854 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 ST5P78524 1137 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.49
RTTN-221ENST00000640736 BRIP1Q9BX63 1249 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
RTTN-221ENST00000640736 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
RTTN-221ENST00000640736 LMOD3Q0VAK6 560 aa18.13■□□□□ 0.49
RTTN-221ENST00000640736 NUP98P52948 1817 aa18.13■□□□□ 0.49
RTTN-221ENST00000640736 RASSF7Q02833 373 aa18.12■□□□□ 0.49
RTTN-221ENST00000640736 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
RTTN-221ENST00000640736 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
RTTN-221ENST00000640736 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
RTTN-221ENST00000640736 FAM177BA6PVY3 158 aa18.11■□□□□ 0.49
RTTN-221ENST00000640736 MYL6BP14649 208 aa18.11■□□□□ 0.49
RTTN-221ENST00000640736 HLFQ16534 295 aa18.11■□□□□ 0.49
RTTN-221ENST00000640736 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
RTTN-221ENST00000640736 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
RTTN-221ENST00000640736 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
RTTN-221ENST00000640736 KIF3CO14782 793 aa18.09■□□□□ 0.49
RTTN-221ENST00000640736 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
RTTN-221ENST00000640736 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
RTTN-221ENST00000640736 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
RTTN-221ENST00000640736 RGL2O15211 777 aa18.08■□□□□ 0.48
RTTN-221ENST00000640736 EIF2S2P20042 333 aaKnown RBP18.08■□□□□ 0.48
RTTN-221ENST00000640736 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
RTTN-221ENST00000640736 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
RTTN-221ENST00000640736 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
RTTN-221ENST00000640736 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
RTTN-221ENST00000640736 MAP3K15Q6ZN16 1313 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 C21orf2O43822 256 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 TPTE2Q6XPS3 522 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 NMRK2Q9NPI5 230 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 TRIM35Q9UPQ4 493 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 FER1L6Q2WGJ9 1857 aa18.07■□□□□ 0.48
RTTN-221ENST00000640736 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 SRGNP10124 158 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
RTTN-221ENST00000640736 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
RTTN-221ENST00000640736 LMNB1P20700 586 aa18.05■□□□□ 0.48
RTTN-221ENST00000640736 PRELPP51888 382 aa18.05■□□□□ 0.48
RTTN-221ENST00000640736 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
RTTN-221ENST00000640736 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
RTTN-221ENST00000640736 NFKBIEO00221 500 aa18.04■□□□□ 0.48
RTTN-221ENST00000640736 ANXA1P04083 346 aa18.04■□□□□ 0.48
RTTN-221ENST00000640736 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
RTTN-221ENST00000640736 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
RTTN-221ENST00000640736 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
RTTN-221ENST00000640736 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
RTTN-221ENST00000640736 GPTP24298 496 aa18.03■□□□□ 0.48
RTTN-221ENST00000640736 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
RTTN-221ENST00000640736 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
RTTN-221ENST00000640736 CHL1O00533 1208 aa18.02■□□□□ 0.48
RTTN-221ENST00000640736 PDIA6Q15084 440 aa18.02■□□□□ 0.48
RTTN-221ENST00000640736 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
RTTN-221ENST00000640736 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
RTTN-221ENST00000640736 NPR1P16066 1061 aa18.01■□□□□ 0.47
RTTN-221ENST00000640736 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
RTTN-221ENST00000640736 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
RTTN-221ENST00000640736 UBN2Q6ZU65 1347 aa18■□□□□ 0.47
RTTN-221ENST00000640736 ZC3H4Q9UPT8 1303 aaKnown RBP18■□□□□ 0.47
RTTN-221ENST00000640736 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
RTTN-221ENST00000640736 KLRG2A4D1S0 409 aaPredicted RBP18■□□□□ 0.47
RTTN-221ENST00000640736 APAF1O14727 1248 aa18■□□□□ 0.47
RTTN-221ENST00000640736 ERFEQ4G0M1 354 aa18■□□□□ 0.47
RTTN-221ENST00000640736 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
RTTN-221ENST00000640736 RRAGCQ9HB90 399 aa18■□□□□ 0.47
RTTN-221ENST00000640736 TOMM70O94826 608 aa17.99■□□□□ 0.47
RTTN-221ENST00000640736 HSPA6P17066 643 aa17.99■□□□□ 0.47
RTTN-221ENST00000640736 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
RTTN-221ENST00000640736 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
RTTN-221ENST00000640736 GIGYF2Q6Y7W6 1299 aaKnown RBP17.99■□□□□ 0.47
RTTN-221ENST00000640736 C16orf71Q8IYS4 520 aaPredicted RBP17.99■□□□□ 0.47
RTTN-221ENST00000640736 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
RTTN-221ENST00000640736 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
RTTN-221ENST00000640736 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms