RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
ATM-229ENST00000639953 KANK3Q6NY19 840 aa9.27□□□□□ -0.93
ATM-229ENST00000639953 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
ATM-229ENST00000639953 CCDC18Q5T9S5 1454 aa9.27□□□□□ -0.93
ATM-229ENST00000639953 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 C2CD2LO14523 706 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 OIP5O43482 229 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 AIDAQ96BJ3 306 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
ATM-229ENST00000639953 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
ATM-229ENST00000639953 KDM6BO15054 1643 aa9.26□□□□□ -0.93
ATM-229ENST00000639953 TROQ12816 1431 aaPredicted RBP9.25□□□□□ -0.93
ATM-229ENST00000639953 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 BNIP3LO60238 219 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 SMTNP53814 917 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 CTBSQ01459 385 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
ATM-229ENST00000639953 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 PHF24Q9UPV7 400 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 PCDHGA11Q9Y5H2 935 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
ATM-229ENST00000639953 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
ATM-229ENST00000639953 COL17A1Q9UMD9 1497 aaPredicted RBP9.24□□□□□ -0.93
ATM-229ENST00000639953 MAP2K3P46734 347 aa9.24□□□□□ -0.93
ATM-229ENST00000639953 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
ATM-229ENST00000639953 BEND7Q8N7W2 519 aaPredicted RBP9.24□□□□□ -0.93
ATM-229ENST00000639953 GALNT6Q8NCL4 622 aa9.24□□□□□ -0.93
ATM-229ENST00000639953 ALG2Q9H553 416 aa9.24□□□□□ -0.93
ATM-229ENST00000639953 CDK11AQ9UQ88 783 aaPredicted RBP9.24□□□□□ -0.93
ATM-229ENST00000639953 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
ATM-229ENST00000639953 SHISA8B8ZZ34 492 aa9.23□□□□□ -0.93
ATM-229ENST00000639953 SKIP12755 728 aa9.23□□□□□ -0.93
ATM-229ENST00000639953 SOX11P35716 441 aa9.23□□□□□ -0.93
ATM-229ENST00000639953 SNRPNP63162 240 aaKnown RBP9.23□□□□□ -0.93
ATM-229ENST00000639953 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
ATM-229ENST00000639953 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
ATM-229ENST00000639953 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
ATM-229ENST00000639953 MYO5CQ9NQX4 1742 aa9.22□□□□□ -0.93
ATM-229ENST00000639953 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
ATM-229ENST00000639953 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
ATM-229ENST00000639953 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
ATM-229ENST00000639953 TIAM1Q13009 1591 aa9.21□□□□□ -0.93
ATM-229ENST00000639953 FGFR3P22607 806 aa9.21□□□□□ -0.94
ATM-229ENST00000639953 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
ATM-229ENST00000639953 EDARADDQ8WWZ3 215 aa9.21□□□□□ -0.94
ATM-229ENST00000639953 DNAAF2Q9NVR5 837 aaKnown RBP9.21□□□□□ -0.94
ATM-229ENST00000639953 HCN2Q9UL51 889 aa9.21□□□□□ -0.94
ATM-229ENST00000639953 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
ATM-229ENST00000639953 CDC42BPBQ9Y5S2 1711 aa9.21□□□□□ -0.94
ATM-229ENST00000639953 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 A6NJY4 79 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 CDK2AP1O14519 115 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 BMP4P12644 408 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 ATP4AP20648 1035 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 KANK4Q5T7N3 995 aaPredicted RBP9.2□□□□□ -0.94
ATM-229ENST00000639953 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 DEPDC4Q8N2C3 294 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATM-229ENST00000639953 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 LRRC4BQ9NT99 713 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
ATM-229ENST00000639953 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 FANCAO15360 1455 aa9.2□□□□□ -0.94
ATM-229ENST00000639953 POM121CA8CG34 1229 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 ITGB2P05107 769 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 MTFR1Q15390 333 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 EML3Q32P44 896 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 PLCH2O75038 1416 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
ATM-229ENST00000639953 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 ARHGAP5Q13017 1502 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
ATM-229ENST00000639953 PREX2Q70Z35 1606 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 AKNAQ7Z591 1439 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 PODNQ7Z5L7 613 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 NEO1Q92859 1461 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 CFAP74Q9C0B2 1584 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 GGA1Q9UJY5 639 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 NOD1Q9Y239 953 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
ATM-229ENST00000639953 FRMPD1Q5SYB0 1578 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 ARAP3Q8WWN8 1544 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 NCOA4Q13772 614 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 PLA2G4EQ3MJ16 856 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 ADAMTS19Q8TE59 1207 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
ATM-229ENST00000639953 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
ATM-229ENST00000639953 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
ATM-229ENST00000639953 GTF2IP78347 998 aa9.16□□□□□ -0.94
ATM-229ENST00000639953 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
ATM-229ENST00000639953 RICTORQ6R327 1708 aa9.16□□□□□ -0.94
ATM-229ENST00000639953 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms