RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MAFGO15525 162 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 CREB3O43889 395 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 BMP2KQ9NSY1 1161 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-220ENST00000639841 SORBS3O60504 671 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 GCGRP47871 477 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 DAB2P98082 770 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 SF3B2Q13435 895 aaKnown RBP9.83□□□□□ -0.84
NECAP1-220ENST00000639841 SPOCK3Q9BQ16 436 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
NECAP1-220ENST00000639841 EIF3JO75822 258 aaKnown RBP9.82□□□□□ -0.84
NECAP1-220ENST00000639841 PHTF2Q8N3S3 785 aa9.82□□□□□ -0.84
NECAP1-220ENST00000639841 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
NECAP1-220ENST00000639841 DDX56Q9NY93 547 aaKnown RBP9.82□□□□□ -0.84
NECAP1-220ENST00000639841 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
NECAP1-220ENST00000639841 PRPF40AO75400 957 aaKnown RBP9.81□□□□□ -0.84
NECAP1-220ENST00000639841 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
NECAP1-220ENST00000639841 DNAJB2P25686 324 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 TERF2IPQ9NYB0 399 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 PRR12Q9ULL5 1215 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 RACK1P63244 317 aaKnown RBP9.81□□□□□ -0.84
NECAP1-220ENST00000639841 CCDC146Q8IYE0 955 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 VTI1BQ9UEU0 232 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 EMILIN1Q9Y6C2 1016 aa9.81□□□□□ -0.84
NECAP1-220ENST00000639841 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 ENPP3O14638 875 aa9.8□□□□□ -0.84
NECAP1-220ENST00000639841 FGRP09769 529 aa9.8□□□□□ -0.84
NECAP1-220ENST00000639841 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
NECAP1-220ENST00000639841 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 DSC3Q14574 896 aa9.8□□□□□ -0.84
NECAP1-220ENST00000639841 FOXD4L6Q3SYB3 417 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 FOXD4L3Q6VB84 417 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 DNAAF2Q9NVR5 837 aaKnown RBP9.8□□□□□ -0.84
NECAP1-220ENST00000639841 INPP5FQ9Y2H2 1132 aa9.8□□□□□ -0.84
NECAP1-220ENST00000639841 KIF3BO15066 747 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 ZBTB7BO15156 539 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-220ENST00000639841 LGR5O75473 907 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 SLC34A2O95436 690 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 TSPY4P0CV99 314 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 TSPY10P0CW01 314 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
NECAP1-220ENST00000639841 HSPA1LP34931 641 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 TBX4P57082 545 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 UBA5Q9GZZ9 404 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 ZNF394Q53GI3 561 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-220ENST00000639841 SIX5Q8N196 739 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
NECAP1-220ENST00000639841 LRRC9Q6ZRR7 1453 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 NME8Q8N427 588 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 SETDB2Q96T68 719 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
NECAP1-220ENST00000639841 CHIC2Q9UKJ5 165 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 LAS1LQ9Y4W2 734 aaKnown RBP9.78□□□□□ -0.84
NECAP1-220ENST00000639841 PCDHGB7Q9Y5F8 929 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 ABCC3O15438 1527 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 NCOA2Q15596 1464 aa9.78□□□□□ -0.84
NECAP1-220ENST00000639841 STK10O94804 968 aaKnown RBP9.77□□□□□ -0.84
NECAP1-220ENST00000639841 IRX5P78411 483 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-220ENST00000639841 TRAF7Q6Q0C0 670 aa9.77□□□□□ -0.84
NECAP1-220ENST00000639841 SYMPKQ92797 1274 aaKnown RBP9.77□□□□□ -0.84
NECAP1-220ENST00000639841 PRDM10Q9NQV6 1147 aa9.77□□□□□ -0.84
NECAP1-220ENST00000639841 ERVK-7P63135 1459 aa9.77□□□□□ -0.85
NECAP1-220ENST00000639841 SLIT1O75093 1534 aa9.77□□□□□ -0.85
NECAP1-220ENST00000639841 DNAJC6O75061 913 aa9.77□□□□□ -0.85
NECAP1-220ENST00000639841 S100BP04271 92 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-220ENST00000639841 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
NECAP1-220ENST00000639841 SCAF11Q99590 1463 aaKnown RBP9.77□□□□□ -0.85
NECAP1-220ENST00000639841 MAP3K1Q13233 1512 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 LRRC7Q96NW7 1537 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.76□□□□□ -0.85
NECAP1-220ENST00000639841 MAPK8P45983 427 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 SETQ01105 290 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-220ENST00000639841 AMPD3Q01432 767 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 PSMD2Q13200 908 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 FMNL3Q8IVF7 1028 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 PURBQ96QR8 312 aaKnown RBP9.76□□□□□ -0.85
NECAP1-220ENST00000639841 DUOX2Q9NRD8 1548 aa9.76□□□□□ -0.85
NECAP1-220ENST00000639841 G3V3G9 751 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 IGHA2P01877 340 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 RHBDL3P58872 404 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 EML3Q32P44 896 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 TSGA10IPQ3SY00 556 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 SPC25Q9HBM1 224 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 UBR1Q8IWV7 1749 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 ARHGAP23Q9P227 1491 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-220ENST00000639841 NPR3P17342 541 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 PAX3P23760 479 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 SEC13P55735 322 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 SERINC3Q13530 473 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 MRFAP1L1Q96HT8 127 aa9.75□□□□□ -0.85
NECAP1-220ENST00000639841 APLP1P51693 650 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms