RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 NUP98P52948 1817 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 A0A0G2JLW4 131 aa23.27■■□□□ 1.32
SPIN3-220ENST00000639257 HLFQ16534 295 aa23.27■■□□□ 1.32
SPIN3-220ENST00000639257 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
SPIN3-220ENST00000639257 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
SPIN3-220ENST00000639257 PRR5LQ6MZQ0 368 aa23.26■■□□□ 1.31
SPIN3-220ENST00000639257 BICDL1Q6ZP65 573 aa23.26■■□□□ 1.31
SPIN3-220ENST00000639257 SETDB2Q96T68 719 aa23.26■■□□□ 1.31
SPIN3-220ENST00000639257 DDX21Q9NR30 783 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPIN3-220ENST00000639257 MYL6BP14649 208 aa23.25■■□□□ 1.31
SPIN3-220ENST00000639257 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
SPIN3-220ENST00000639257 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
SPIN3-220ENST00000639257 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
SPIN3-220ENST00000639257 CCER2I3L3R5 266 aa23.23■■□□□ 1.31
SPIN3-220ENST00000639257 FAM9BQ8IZU0 186 aa23.23■■□□□ 1.31
SPIN3-220ENST00000639257 ANXA1P04083 346 aa23.22■■□□□ 1.31
SPIN3-220ENST00000639257 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SPIN3-220ENST00000639257 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
SPIN3-220ENST00000639257 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
SPIN3-220ENST00000639257 BRIP1Q9BX63 1249 aa23.22■■□□□ 1.31
SPIN3-220ENST00000639257 IBTKQ9P2D0 1353 aaPredicted RBP23.22■■□□□ 1.31
SPIN3-220ENST00000639257 CHRNA5P30532 468 aa23.21■■□□□ 1.31
SPIN3-220ENST00000639257 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
SPIN3-220ENST00000639257 KIF6Q6ZMV9 814 aa23.21■■□□□ 1.31
SPIN3-220ENST00000639257 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
SPIN3-220ENST00000639257 PIM2Q9P1W9 311 aa23.21■■□□□ 1.31
SPIN3-220ENST00000639257 CHPF2Q9P2E5 772 aa23.21■■□□□ 1.31
SPIN3-220ENST00000639257 NIP7Q9Y221 180 aaKnown RBP eCLIP23.21■■□□□ 1.31
SPIN3-220ENST00000639257 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
SPIN3-220ENST00000639257 YY1P25490 414 aa23.2■■□□□ 1.3
SPIN3-220ENST00000639257 ZNF34Q8IZ26 560 aa23.2■■□□□ 1.3
SPIN3-220ENST00000639257 CNBD1Q8NA66 436 aa23.2■■□□□ 1.3
SPIN3-220ENST00000639257 DBF4Q9UBU7 674 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-220ENST00000639257 PDZRN3Q9UPQ7 1066 aa23.2■■□□□ 1.3
SPIN3-220ENST00000639257 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
SPIN3-220ENST00000639257 KLRG2A4D1S0 409 aaPredicted RBP23.19■■□□□ 1.3
SPIN3-220ENST00000639257 UBN2Q6ZU65 1347 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 COPS6Q7L5N1 327 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 XAGE3Q8WTP9 111 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 ZBTB3Q9H5J0 574 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 ANKRD36CQ5JPF3 1778 aa23.18■■□□□ 1.3
SPIN3-220ENST00000639257 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
SPIN3-220ENST00000639257 NBPF5PQ86XG9 351 aaPredicted RBP23.17■■□□□ 1.3
SPIN3-220ENST00000639257 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
SPIN3-220ENST00000639257 WWC3Q9ULE0 1092 aa23.17■■□□□ 1.3
SPIN3-220ENST00000639257 PDE6BP35913 854 aa23.16■■□□□ 1.3
SPIN3-220ENST00000639257 DALRD3Q5D0E6 543 aaKnown RBP23.16■■□□□ 1.3
SPIN3-220ENST00000639257 TPTE2Q6XPS3 522 aa23.16■■□□□ 1.3
SPIN3-220ENST00000639257 TSPYL6Q8N831 410 aa23.16■■□□□ 1.3
SPIN3-220ENST00000639257 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
SPIN3-220ENST00000639257 ST5P78524 1137 aa23.15■■□□□ 1.3
SPIN3-220ENST00000639257 HYPKQ9NX55 129 aa23.15■■□□□ 1.3
SPIN3-220ENST00000639257 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
SPIN3-220ENST00000639257 H0YIN7 160 aa23.14■■□□□ 1.29
SPIN3-220ENST00000639257 C2CD5Q86YS7 1000 aa23.14■■□□□ 1.29
SPIN3-220ENST00000639257 CCDC24Q8N4L8 307 aa23.14■■□□□ 1.29
SPIN3-220ENST00000639257 ADCY9O60503 1353 aa23.14■■□□□ 1.29
SPIN3-220ENST00000639257 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
SPIN3-220ENST00000639257 SPINK5Q9NQ38 1064 aaPredicted RBP23.13■■□□□ 1.29
SPIN3-220ENST00000639257 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
SPIN3-220ENST00000639257 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
SPIN3-220ENST00000639257 ELL2O00472 640 aaPredicted RBP23.12■■□□□ 1.29
SPIN3-220ENST00000639257 NTSR2O95665 410 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 SRGNP10124 158 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 ABCC12Q96J65 1359 aa23.12■■□□□ 1.29
SPIN3-220ENST00000639257 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
SPIN3-220ENST00000639257 SUSD4Q5VX71 490 aa23.11■■□□□ 1.29
SPIN3-220ENST00000639257 TTLL6Q8N841 843 aa23.11■■□□□ 1.29
SPIN3-220ENST00000639257 GPTP24298 496 aa23.1■■□□□ 1.29
SPIN3-220ENST00000639257 AIMP1Q12904 312 aaKnown RBP23.1■■□□□ 1.29
SPIN3-220ENST00000639257 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
SPIN3-220ENST00000639257 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
SPIN3-220ENST00000639257 STYK1Q6J9G0 422 aa23.1■■□□□ 1.29
SPIN3-220ENST00000639257 ANKRD13DQ6ZTN6 518 aa23.1■■□□□ 1.29
SPIN3-220ENST00000639257 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
SPIN3-220ENST00000639257 RNF123Q5XPI4 1314 aa23.09■■□□□ 1.29
SPIN3-220ENST00000639257 TWISTNBQ3B726 338 aaPredicted RBP23.09■■□□□ 1.29
SPIN3-220ENST00000639257 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
SPIN3-220ENST00000639257 NLRP10Q86W26 655 aa23.08■■□□□ 1.29
SPIN3-220ENST00000639257 ERFEQ4G0M1 354 aa23.07■■□□□ 1.28
SPIN3-220ENST00000639257 SLC10A5Q5PT55 438 aa23.07■■□□□ 1.28
SPIN3-220ENST00000639257 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
SPIN3-220ENST00000639257 ZNF784Q8NCA9 323 aaPredicted RBP23.07■■□□□ 1.28
SPIN3-220ENST00000639257 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
SPIN3-220ENST00000639257 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
SPIN3-220ENST00000639257 PHAXQ9H814 394 aaKnown RBP23.07■■□□□ 1.28
SPIN3-220ENST00000639257 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
SPIN3-220ENST00000639257 NPHP1O15259 732 aa23.06■■□□□ 1.28
SPIN3-220ENST00000639257 TRIM28Q13263 835 aaKnown RBP23.06■■□□□ 1.28
SPIN3-220ENST00000639257 PPP1R42Q7Z4L9 355 aa23.06■■□□□ 1.28
SPIN3-220ENST00000639257 NUTM1Q86Y26 1132 aa23.06■■□□□ 1.28
SPIN3-220ENST00000639257 FAM177BA6PVY3 158 aa23.05■■□□□ 1.28
SPIN3-220ENST00000639257 VAMP4O75379 141 aa23.05■■□□□ 1.28
SPIN3-220ENST00000639257 NPR1P16066 1061 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms