RNA–Protein interactions for RNA: ENST00000638075.1

EFHC1-238, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-238	ENST00000638075	LMOD3	Q0VAK6	560 aa		13.36	□□□□□ -0.27
EFHC1-238	ENST00000638075	CCDC146	Q8IYE0	955 aa		13.36	□□□□□ -0.27
EFHC1-238	ENST00000638075	RUNDC1	Q96C34	613 aa		13.36	□□□□□ -0.27
EFHC1-238	ENST00000638075	TSPYL4	Q9UJ04	414 aa		13.36	□□□□□ -0.27
EFHC1-238	ENST00000638075	KLRG2	A4D1S0	409 aa	Predicted RBP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	SRGN	P10124	158 aa		13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	ST5	P78524	1137 aa		13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	WDR43	Q15061	677 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	TPTE2	Q6XPS3	522 aa		13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	RNF181	Q9P0P0	153 aa		13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	TRIM35	Q9UPQ4	493 aa		13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	RRP7A	Q9Y3A4	280 aa	Known RBP	13.35	□□□□□ -0.27
EFHC1-238	ENST00000638075	SENP3-EIF4A1	A0A087X0R7	540 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	CHL1	O00533	1208 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	NPHP1	O15259	732 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	PRELP	P51888	382 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	NEUROD2	Q15784	382 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	STYK1	Q6J9G0	422 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	NGEF	Q8N5V2	710 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	ERBB4	Q15303	1308 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	MAP3K15	Q6ZN16	1313 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	NUP98	P52948	1817 aa		13.34	□□□□□ -0.27
EFHC1-238	ENST00000638075	COL11A2	P13942	1736 aa	Predicted RBP	13.33	□□□□□ -0.27
EFHC1-238	ENST00000638075	MYL6B	P14649	208 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	LMNB1	P20700	586 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	ZEB1	P37275	1124 aa	Predicted RBP	13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	PDIA6	Q15084	440 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	TTLL7	Q6ZT98	887 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	LRP10	Q7Z4F1	713 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	CNKSR1	Q969H4	720 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	MASTL	Q96GX5	879 aa		13.33	□□□□□ -0.28
EFHC1-238	ENST00000638075	SLX4	Q8IY92	1834 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	CCDC88A	Q3V6T2	1871 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	NFKBIE	O00221	500 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	C21orf2	O43822	256 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	RASSF7	Q02833	373 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	NMRK2	Q9NPI5	230 aa		13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.32	□□□□□ -0.28
EFHC1-238	ENST00000638075	C7orf43	Q8WVR3	580 aa		13.31	□□□□□ -0.28
EFHC1-238	ENST00000638075	FER1L6	Q2WGJ9	1857 aa		13.31	□□□□□ -0.28
EFHC1-238	ENST00000638075	FAM177B	A6PVY3	158 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	TOMM70	O94826	608 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	NPR1	P16066	1061 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	EIF2S2	P20042	333 aa	Known RBP	13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	PRPF40B	Q6NWY9	871 aa	Known RBP	13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	KIF6	Q6ZMV9	814 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	ZNF34	Q8IZ26	560 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	KDM2B	Q8NHM5	1336 aa		13.3	□□□□□ -0.28
EFHC1-238	ENST00000638075	PROSER3	Q2NL68	480 aa		13.29	□□□□□ -0.28
EFHC1-238	ENST00000638075	NYX	Q9GZU5	481 aa		13.29	□□□□□ -0.28
EFHC1-238	ENST00000638075	ZBTB3	Q9H5J0	574 aa		13.29	□□□□□ -0.28
EFHC1-238	ENST00000638075	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.29	□□□□□ -0.28
EFHC1-238	ENST00000638075	LTBP3	Q9NS15	1303 aa		13.29	□□□□□ -0.28
EFHC1-238	ENST00000638075	ARFGEF2	Q9Y6D5	1785 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	GLTPD2	A6NH11	291 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	HSPA6	P17066	643 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	GTF2E1	P29083	439 aa	Predicted RBP	13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	KRT24	Q2M2I5	525 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	SOGA3	Q5TF21	947 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	SUSD4	Q5VX71	490 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	CFAP44	Q96MT7	982 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	UBN2	Q6ZU65	1347 aa		13.28	□□□□□ -0.28
EFHC1-238	ENST00000638075	CACNA1S	Q13698	1873 aa		13.27	□□□□□ -0.28
EFHC1-238	ENST00000638075	DICER1	Q9UPY3	1922 aa	Known RBP	13.27	□□□□□ -0.28
EFHC1-238	ENST00000638075	APAF1	O14727	1248 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	ANXA1	P04083	346 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	ZNF853	P0CG23	659 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	GPT	P24298	496 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	CRY2	Q49AN0	593 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	ERFE	Q4G0M1	354 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	COPS6	Q7L5N1	327 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	NUTM1	Q86Y26	1132 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	RRAGC	Q9HB90	399 aa		13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	LAS1L	Q9Y4W2	734 aa	Known RBP	13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.27	□□□□□ -0.29
EFHC1-238	ENST00000638075	HOXB7	P09629	217 aa		13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	ALDH1B1	P30837	517 aa		13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	CCDC184	Q52MB2	194 aa		13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	RBM46	Q8TBY0	533 aa	Known RBP	13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	NECTIN2	Q92692	538 aa		13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	TAOK3	Q9H2K8	898 aa		13.26	□□□□□ -0.29
EFHC1-238	ENST00000638075	ABCC12	Q96J65	1359 aa		13.25	□□□□□ -0.29
EFHC1-238	ENST00000638075	NTSR2	O95665	410 aa		13.25	□□□□□ -0.29
EFHC1-238	ENST00000638075	HOXA10	P31260	410 aa	Predicted RBP	13.25	□□□□□ -0.29
EFHC1-238	ENST00000638075	PARP10	Q53GL7	1025 aa		13.25	□□□□□ -0.29
EFHC1-238	ENST00000638075	MBIP	Q9NS73	344 aa		13.25	□□□□□ -0.29
EFHC1-238	ENST00000638075	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	RIC1	Q4ADV7	1423 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	VEGFA	P15692	232 aa	Predicted RBP	13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	CCDC93	Q567U6	631 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	SLC10A5	Q5PT55	438 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	DPY19L2	Q6NUT2	758 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	PPP1R42	Q7Z4L9	355 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	XAGE3	Q8WTP9	111 aa		13.24	□□□□□ -0.29
EFHC1-238	ENST00000638075	TIAM2	Q8IVF5	1701 aa		13.23	□□□□□ -0.29

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