RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CHRNA5P30532 468 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 ST5P78524 1137 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 CCDC27Q2M243 656 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 TTLL7Q6ZT98 887 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
LINC00339-207ENST00000634712 CNBD1Q8NA66 436 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 CHD4Q14839 1912 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
LINC00339-207ENST00000634712 H0YIN7 160 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 HOXB7P09629 217 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 KCNA3P22001 575 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 HLFQ16534 295 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
LINC00339-207ENST00000634712 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 PRR5LQ6MZQ0 368 aa20.36■□□□□ 0.85
LINC00339-207ENST00000634712 PDE6BP35913 854 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 ZBTB3Q9H5J0 574 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
LINC00339-207ENST00000634712 BCORQ6W2J9 1755 aa20.35■□□□□ 0.85
LINC00339-207ENST00000634712 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 ANXA1P04083 346 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 GTF2E1P29083 439 aaPredicted RBP20.34■□□□□ 0.85
LINC00339-207ENST00000634712 PDIA6Q15084 440 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
LINC00339-207ENST00000634712 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
LINC00339-207ENST00000634712 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
LINC00339-207ENST00000634712 PROSER3Q2NL68 480 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 NRXN2Q9P2S2 1712 aa20.34■□□□□ 0.85
LINC00339-207ENST00000634712 KIAA1551Q9HCM1 1747 aa20.33■□□□□ 0.84
LINC00339-207ENST00000634712 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.84
LINC00339-207ENST00000634712 ARHGAP27Q6ZUM4 889 aa20.33■□□□□ 0.84
LINC00339-207ENST00000634712 COPS6Q7L5N1 327 aa20.33■□□□□ 0.84
LINC00339-207ENST00000634712 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.84
LINC00339-207ENST00000634712 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
LINC00339-207ENST00000634712 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
LINC00339-207ENST00000634712 GIGYF2Q6Y7W6 1299 aaKnown RBP20.31■□□□□ 0.84
LINC00339-207ENST00000634712 TTLL6Q8N841 843 aa20.31■□□□□ 0.84
LINC00339-207ENST00000634712 XAGE3Q8WTP9 111 aa20.31■□□□□ 0.84
LINC00339-207ENST00000634712 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.84
LINC00339-207ENST00000634712 NYXQ9GZU5 481 aa20.31■□□□□ 0.84
LINC00339-207ENST00000634712 GPTP24298 496 aa20.3■□□□□ 0.84
LINC00339-207ENST00000634712 LRP10Q7Z4F1 713 aa20.3■□□□□ 0.84
LINC00339-207ENST00000634712 IL16Q14005 1332 aa20.29■□□□□ 0.84
LINC00339-207ENST00000634712 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
LINC00339-207ENST00000634712 HSP90AB3PQ58FF7 597 aa20.28■□□□□ 0.84
LINC00339-207ENST00000634712 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
LINC00339-207ENST00000634712 C8orf58Q8NAV2 365 aa20.28■□□□□ 0.84
LINC00339-207ENST00000634712 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
LINC00339-207ENST00000634712 NUP98P52948 1817 aa20.27■□□□□ 0.84
LINC00339-207ENST00000634712 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
LINC00339-207ENST00000634712 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.84
LINC00339-207ENST00000634712 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
LINC00339-207ENST00000634712 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
LINC00339-207ENST00000634712 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
LINC00339-207ENST00000634712 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
LINC00339-207ENST00000634712 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
LINC00339-207ENST00000634712 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
LINC00339-207ENST00000634712 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
LINC00339-207ENST00000634712 MASTLQ96GX5 879 aa20.25■□□□□ 0.83
LINC00339-207ENST00000634712 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
LINC00339-207ENST00000634712 STYK1Q6J9G0 422 aa20.24■□□□□ 0.83
LINC00339-207ENST00000634712 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
LINC00339-207ENST00000634712 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 SRGNP10124 158 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 UBN2Q6ZU65 1347 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
LINC00339-207ENST00000634712 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
LINC00339-207ENST00000634712 ERFEQ4G0M1 354 aa20.22■□□□□ 0.83
LINC00339-207ENST00000634712 UTP14AQ9BVJ6 771 aaKnown RBP20.22■□□□□ 0.83
LINC00339-207ENST00000634712 NPR1P16066 1061 aa20.21■□□□□ 0.83
LINC00339-207ENST00000634712 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
LINC00339-207ENST00000634712 STK31Q9BXU1 1019 aa20.21■□□□□ 0.83
LINC00339-207ENST00000634712 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
LINC00339-207ENST00000634712 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
LINC00339-207ENST00000634712 RIC3Q7Z5B4 369 aa20.21■□□□□ 0.83
LINC00339-207ENST00000634712 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
LINC00339-207ENST00000634712 KLRG2A4D1S0 409 aaPredicted RBP20.2■□□□□ 0.82
LINC00339-207ENST00000634712 C21orf2O43822 256 aa20.2■□□□□ 0.82
LINC00339-207ENST00000634712 NTSR2O95665 410 aa20.2■□□□□ 0.82
LINC00339-207ENST00000634712 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
LINC00339-207ENST00000634712 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
LINC00339-207ENST00000634712 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
LINC00339-207ENST00000634712 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
LINC00339-207ENST00000634712 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
LINC00339-207ENST00000634712 ALDH1B1P30837 517 aa20.19■□□□□ 0.82
LINC00339-207ENST00000634712 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
LINC00339-207ENST00000634712 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
LINC00339-207ENST00000634712 C9orf131Q5VYM1 1079 aa20.18■□□□□ 0.82
LINC00339-207ENST00000634712 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms