RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
SPTAN1-214ENST00000628614 NBPF5PQ86XG9 351 aaPredicted RBP22.52■■□□□ 1.2
SPTAN1-214ENST00000628614 ZNF526Q8TF50 670 aaPredicted RBP22.52■■□□□ 1.2
SPTAN1-214ENST00000628614 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
SPTAN1-214ENST00000628614 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
SPTAN1-214ENST00000628614 KIF6Q6ZMV9 814 aa22.51■■□□□ 1.19
SPTAN1-214ENST00000628614 CCDC24Q8N4L8 307 aa22.51■■□□□ 1.19
SPTAN1-214ENST00000628614 TRIM35Q9UPQ4 493 aa22.51■■□□□ 1.19
SPTAN1-214ENST00000628614 ERVV-1B6SEH8 477 aa22.5■■□□□ 1.19
SPTAN1-214ENST00000628614 C9orf131Q5VYM1 1079 aa22.5■■□□□ 1.19
SPTAN1-214ENST00000628614 NGEFQ8N5V2 710 aa22.5■■□□□ 1.19
SPTAN1-214ENST00000628614 MYL6BP14649 208 aa22.49■■□□□ 1.19
SPTAN1-214ENST00000628614 HLFQ16534 295 aa22.49■■□□□ 1.19
SPTAN1-214ENST00000628614 ZNF622Q969S3 477 aaKnown RBP eCLIP22.49■■□□□ 1.19
SPTAN1-214ENST00000628614 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
SPTAN1-214ENST00000628614 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
SPTAN1-214ENST00000628614 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
SPTAN1-214ENST00000628614 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
SPTAN1-214ENST00000628614 CHL1O00533 1208 aa22.47■■□□□ 1.19
SPTAN1-214ENST00000628614 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
SPTAN1-214ENST00000628614 TTLL7Q6ZT98 887 aa22.46■■□□□ 1.19
SPTAN1-214ENST00000628614 RNF181Q9P0P0 153 aa22.46■■□□□ 1.19
SPTAN1-214ENST00000628614 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
SPTAN1-214ENST00000628614 SRGNP10124 158 aa22.45■■□□□ 1.18
SPTAN1-214ENST00000628614 STYK1Q6J9G0 422 aa22.45■■□□□ 1.18
SPTAN1-214ENST00000628614 CNKSR1Q969H4 720 aa22.45■■□□□ 1.18
SPTAN1-214ENST00000628614 MASTLQ96GX5 879 aa22.45■■□□□ 1.18
SPTAN1-214ENST00000628614 RASSF7Q02833 373 aa22.44■■□□□ 1.18
SPTAN1-214ENST00000628614 NYXQ9GZU5 481 aa22.44■■□□□ 1.18
SPTAN1-214ENST00000628614 FAM177BA6PVY3 158 aa22.43■■□□□ 1.18
SPTAN1-214ENST00000628614 APAF1O14727 1248 aa22.43■■□□□ 1.18
SPTAN1-214ENST00000628614 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
SPTAN1-214ENST00000628614 ZBTB3Q9H5J0 574 aa22.43■■□□□ 1.18
SPTAN1-214ENST00000628614 ZC3H4Q9UPT8 1303 aaKnown RBP22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 KLRG2A4D1S0 409 aaPredicted RBP22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 LMNB1P20700 586 aa22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 PDIA6Q15084 440 aa22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 LRP10Q7Z4F1 713 aa22.42■■□□□ 1.18
SPTAN1-214ENST00000628614 IBTKQ9P2D0 1353 aaPredicted RBP22.41■■□□□ 1.18
SPTAN1-214ENST00000628614 NPR1P16066 1061 aa22.41■■□□□ 1.18
SPTAN1-214ENST00000628614 CALD1Q05682 793 aaKnown RBP22.41■■□□□ 1.18
SPTAN1-214ENST00000628614 PRPF40BQ6NWY9 871 aaKnown RBP22.41■■□□□ 1.18
SPTAN1-214ENST00000628614 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
SPTAN1-214ENST00000628614 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 NFKBIEO00221 500 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 C21orf2O43822 256 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 HOXB7P09629 217 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 PROSER3Q2NL68 480 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 SOGA3Q5TF21 947 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 NUP98P52948 1817 aa22.4■■□□□ 1.18
SPTAN1-214ENST00000628614 SBF1O95248 1867 aa22.39■■□□□ 1.18
SPTAN1-214ENST00000628614 KIF3CO14782 793 aa22.39■■□□□ 1.17
SPTAN1-214ENST00000628614 GPTP24298 496 aa22.39■■□□□ 1.17
SPTAN1-214ENST00000628614 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
SPTAN1-214ENST00000628614 NECTIN2Q92692 538 aa22.39■■□□□ 1.17
SPTAN1-214ENST00000628614 ZNF219Q9P2Y4 722 aaPredicted RBP22.39■■□□□ 1.17
SPTAN1-214ENST00000628614 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 UBN2Q6ZU65 1347 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 KDM2BQ8NHM5 1336 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 ANP32CO43423 234 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 ANXA1P04083 346 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
SPTAN1-214ENST00000628614 MBIPQ9NS73 344 aa22.37■■□□□ 1.17
SPTAN1-214ENST00000628614 IFT57Q9NWB7 429 aa22.37■■□□□ 1.17
SPTAN1-214ENST00000628614 RIC1Q4ADV7 1423 aa22.37■■□□□ 1.17
SPTAN1-214ENST00000628614 ABCC12Q96J65 1359 aa22.37■■□□□ 1.17
SPTAN1-214ENST00000628614 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 GNAI1P63096 354 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 CCDC184Q52MB2 194 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
SPTAN1-214ENST00000628614 LTBP3Q9NS15 1303 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 PRELPP51888 382 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 ERFEQ4G0M1 354 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 HSP90AB3PQ58FF7 597 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 XAGE3Q8WTP9 111 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 TAOK3Q9H2K8 898 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 NMRK2Q9NPI5 230 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 CHPF2Q9P2E5 772 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 SLX4Q8IY92 1834 aa22.35■■□□□ 1.17
SPTAN1-214ENST00000628614 ALDH1B1P30837 517 aa22.34■■□□□ 1.17
SPTAN1-214ENST00000628614 AIMP1Q12904 312 aaKnown RBP22.34■■□□□ 1.17
SPTAN1-214ENST00000628614 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 CACNA1SQ13698 1873 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 FER1L6Q2WGJ9 1857 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 NTSR2O95665 410 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 CRY2Q49AN0 593 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 DUSP27Q5VZP5 1158 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 MRS2Q9HD23 443 aa22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.17
SPTAN1-214ENST00000628614 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
SPTAN1-214ENST00000628614 TOMM70O94826 608 aa22.32■■□□□ 1.16
SPTAN1-214ENST00000628614 C7orf43Q8WVR3 580 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms