RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 ZPR1O75312 459 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 HOXB7P09629 217 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 NFIXQ14938 502 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 DUSP27Q5VZP5 1158 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 DZIP3Q86Y13 1208 aaKnown RBP10.25□□□□□ -0.77
CCDC163-204ENST00000628293 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
CCDC163-204ENST00000628293 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
CCDC163-204ENST00000628293 FANCIQ9NVI1 1328 aa10.25□□□□□ -0.77
CCDC163-204ENST00000628293 TNRC6CQ9HCJ0 1690 aaKnown RBP10.25□□□□□ -0.77
CCDC163-204ENST00000628293 ARFGEF1Q9Y6D6 1849 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 CACNA1SQ13698 1873 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 ANXA1P04083 346 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 EIF2S2P20042 333 aaKnown RBP10.24□□□□□ -0.77
CCDC163-204ENST00000628293 TBC1D9BQ66K14 1250 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 TTLL7Q6ZT98 887 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 WDR63Q8IWG1 891 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 TSPYL6Q8N831 410 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 CARMIL3Q8ND23 1372 aa10.24□□□□□ -0.77
CCDC163-204ENST00000628293 CHD4Q14839 1912 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 GOLGB1Q14789 3259 aaKnown RBP10.23□□□□□ -0.77
CCDC163-204ENST00000628293 MYL6BP14649 208 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 HLFQ16534 295 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 NGEFQ8N5V2 710 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 LAMB2P55268 1798 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 ATP10DQ9P241 1426 aa10.23□□□□□ -0.77
CCDC163-204ENST00000628293 RGL2O15211 777 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 HDGFL1Q5TGJ6 251 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 DDX21Q9NR30 783 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC163-204ENST00000628293 CHPF2Q9P2E5 772 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 MAP3K15Q6ZN16 1313 aa10.22□□□□□ -0.77
CCDC163-204ENST00000628293 ELL2O00472 640 aaPredicted RBP10.21□□□□□ -0.77
CCDC163-204ENST00000628293 DDX60Q8IY21 1712 aaKnown RBP10.21□□□□□ -0.78
CCDC163-204ENST00000628293 ERVV-1B6SEH8 477 aa10.2□□□□□ -0.78
CCDC163-204ENST00000628293 SERPINB2P05120 415 aa10.2□□□□□ -0.78
CCDC163-204ENST00000628293 CLEC4GQ6UXB4 293 aa10.2□□□□□ -0.78
CCDC163-204ENST00000628293 BICDL1Q6ZP65 573 aa10.2□□□□□ -0.78
CCDC163-204ENST00000628293 UBN2Q6ZU65 1347 aa10.2□□□□□ -0.78
CCDC163-204ENST00000628293 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
CCDC163-204ENST00000628293 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
CCDC163-204ENST00000628293 PRR5LQ6MZQ0 368 aa10.19□□□□□ -0.78
CCDC163-204ENST00000628293 COPS6Q7L5N1 327 aa10.19□□□□□ -0.78
CCDC163-204ENST00000628293 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
CCDC163-204ENST00000628293 XAGE3Q8WTP9 111 aa10.19□□□□□ -0.78
CCDC163-204ENST00000628293 ZBTB3Q9H5J0 574 aa10.19□□□□□ -0.78
CCDC163-204ENST00000628293 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
CCDC163-204ENST00000628293 IBTKQ9P2D0 1353 aaPredicted RBP10.18□□□□□ -0.78
CCDC163-204ENST00000628293 YBX3P16989 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC163-204ENST00000628293 KCNA3P22001 575 aa10.18□□□□□ -0.78
CCDC163-204ENST00000628293 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
CCDC163-204ENST00000628293 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
CCDC163-204ENST00000628293 ZNF34Q8IZ26 560 aa10.18□□□□□ -0.78
CCDC163-204ENST00000628293 ZNF652Q9Y2D9 606 aa10.18□□□□□ -0.78
CCDC163-204ENST00000628293 UTRNP46939 3433 aa10.18□□□□□ -0.78
CCDC163-204ENST00000628293 ABCC12Q96J65 1359 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 SLX4Q8IY92 1834 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 VAMP4O75379 141 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 DPEP1P16444 411 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 TGFB2P61812 414 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 SLFN5Q08AF3 891 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 AIMP1Q12904 312 aaKnown RBP10.17□□□□□ -0.78
CCDC163-204ENST00000628293 TRMT2AQ8IZ69 625 aaKnown RBP10.17□□□□□ -0.78
CCDC163-204ENST00000628293 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
CCDC163-204ENST00000628293 HYPKQ9NX55 129 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 NIP7Q9Y221 180 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC163-204ENST00000628293 SBF1O95248 1867 aa10.17□□□□□ -0.78
CCDC163-204ENST00000628293 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 A0A0G2JLW4 131 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 TCERG1O14776 1098 aaKnown RBP10.16□□□□□ -0.78
CCDC163-204ENST00000628293 GPTP24298 496 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 CHRNA5P30532 468 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 CCDC30Q5VVM6 783 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 G2E3Q7L622 706 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 MYH16Q9H6N6 1097 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 TAF1P21675 1872 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 FER1L6Q2WGJ9 1857 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 CCDC88AQ3V6T2 1871 aa10.16□□□□□ -0.78
CCDC163-204ENST00000628293 ADCY9O60503 1353 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 MYH3P11055 1940 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 E9PSI1 815 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 ZBTB22O15209 634 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 NTSR2O95665 410 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 YY1P25490 414 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 CNBD1Q8NA66 436 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.78
CCDC163-204ENST00000628293 TCIRG1Q13488 830 aa10.14□□□□□ -0.79
CCDC163-204ENST00000628293 SUSD4Q5VX71 490 aa10.14□□□□□ -0.79
CCDC163-204ENST00000628293 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CCDC163-204ENST00000628293 NBPF5PQ86XG9 351 aaPredicted RBP10.14□□□□□ -0.79
CCDC163-204ENST00000628293 ISCA1Q9BUE6 129 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms