RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 CACNA1FO60840 1977 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
CHD2-213ENST00000628118 USPL1Q5W0Q7 1092 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
CHD2-213ENST00000628118 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 ARXQ96QS3 562 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
CHD2-213ENST00000628118 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
CHD2-213ENST00000628118 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
CHD2-213ENST00000628118 CAMTA2O94983 1202 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
CHD2-213ENST00000628118 SLFN5Q08AF3 891 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 PDIA6Q15084 440 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 KRT24Q2M2I5 525 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
CHD2-213ENST00000628118 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
CHD2-213ENST00000628118 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 MAP3K15Q6ZN16 1313 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 MMP10P09238 476 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 MYL6BP14649 208 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 TM4SF1P30408 202 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHD2-213ENST00000628118 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 MSL1Q68DK7 614 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 SMIM5Q71RC9 77 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 STK31Q9BXU1 1019 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 BCL2L12Q9HB09 334 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 SRP68Q9UHB9 627 aaKnown RBP10.34□□□□□ -0.75
CHD2-213ENST00000628118 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 BCORQ6W2J9 1755 aa10.34□□□□□ -0.75
CHD2-213ENST00000628118 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
CHD2-213ENST00000628118 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 VAMP4O75379 141 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
CHD2-213ENST00000628118 EXOSC9Q06265 439 aaKnown RBP10.33□□□□□ -0.76
CHD2-213ENST00000628118 TRMT2AQ8IZ69 625 aaKnown RBP10.33□□□□□ -0.76
CHD2-213ENST00000628118 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 CD2APQ9Y5K6 639 aa10.33□□□□□ -0.76
CHD2-213ENST00000628118 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
CHD2-213ENST00000628118 NFIXQ14938 502 aa10.32□□□□□ -0.76
CHD2-213ENST00000628118 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
CHD2-213ENST00000628118 COPS6Q7L5N1 327 aa10.32□□□□□ -0.76
CHD2-213ENST00000628118 PLBD2Q8NHP8 589 aa10.32□□□□□ -0.76
CHD2-213ENST00000628118 SETDB2Q96T68 719 aa10.32□□□□□ -0.76
CHD2-213ENST00000628118 ATP10DQ9P241 1426 aa10.32□□□□□ -0.76
CHD2-213ENST00000628118 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 POLRMTO00411 1230 aaKnown RBP10.31□□□□□ -0.76
CHD2-213ENST00000628118 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 PARP10Q53GL7 1025 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 TTLL7Q6ZT98 887 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 XAGE3Q8WTP9 111 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
CHD2-213ENST00000628118 IBTKQ9P2D0 1353 aaPredicted RBP10.3□□□□□ -0.76
CHD2-213ENST00000628118 SERPINB2P05120 415 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 TBC1D9BQ66K14 1250 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 NYXQ9GZU5 481 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 NUP98P52948 1817 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 RNF123Q5XPI4 1314 aa10.3□□□□□ -0.76
CHD2-213ENST00000628118 ANXA1P04083 346 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 TGFB2P61812 414 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 DDR1Q08345 913 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 AIMP1Q12904 312 aaKnown RBP10.29□□□□□ -0.76
CHD2-213ENST00000628118 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 TPTE2Q6XPS3 522 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 SYT17Q9BSW7 474 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 FHDC1Q9C0D6 1143 aaPredicted RBP10.29□□□□□ -0.76
CHD2-213ENST00000628118 NIP7Q9Y221 180 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD2-213ENST00000628118 C10orf71Q711Q0 1435 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 NRXN2Q9P2S2 1712 aa10.29□□□□□ -0.76
CHD2-213ENST00000628118 KIF13BQ9NQT8 1826 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 ST5P78524 1137 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
CHD2-213ENST00000628118 HLFQ16534 295 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 CHRDL2Q6WN34 429 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 ZBTB3Q9H5J0 574 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 CLEC11AQ9Y240 323 aa10.28□□□□□ -0.76
CHD2-213ENST00000628118 NPHP1O15259 732 aa10.27□□□□□ -0.77
CHD2-213ENST00000628118 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
CHD2-213ENST00000628118 KSR2Q6VAB6 950 aa10.27□□□□□ -0.77
CHD2-213ENST00000628118 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
CHD2-213ENST00000628118 CNBD1Q8NA66 436 aa10.27□□□□□ -0.77
CHD2-213ENST00000628118 PHAXQ9H814 394 aaKnown RBP10.27□□□□□ -0.77
CHD2-213ENST00000628118 AFDNP55196 1824 aaKnown RBP10.27□□□□□ -0.77
CHD2-213ENST00000628118 HSP90B1P14625 803 aaKnown RBP10.26□□□□□ -0.77
CHD2-213ENST00000628118 PDE6BP35913 854 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms