RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ACBD3Q9H3P7 528 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 GEMIN8Q9NWZ8 242 aaKnown RBP10.48□□□□□ -0.73
CDKL5-206ENST00000623610 INTUQ9ULD6 942 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 ATP7AQ04656 1500 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-206ENST00000623610 MLECQ14165 292 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-206ENST00000623610 TMEM164Q5U3C3 297 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 PRPF38AQ8NAV1 312 aaKnown RBP10.47□□□□□ -0.73
CDKL5-206ENST00000623610 PPM1EQ8WY54 764 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 CEP89Q96ST8 783 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 INO80Q9ULG1 1556 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-206ENST00000623610 CCDC141Q6ZP82 1450 aa10.47□□□□□ -0.73
CDKL5-206ENST00000623610 SCNN1AP37088 669 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 MRPL58Q14197 206 aaKnown RBP10.46□□□□□ -0.73
CDKL5-206ENST00000623610 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 UCN2Q96RP3 112 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 STK26Q9P289 416 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 ANAPC4Q9UJX5 808 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 FGD6Q6ZV73 1430 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 PTPN23Q9H3S7 1636 aa10.46□□□□□ -0.73
CDKL5-206ENST00000623610 NFE2L2Q16236 605 aa10.46□□□□□ -0.74
CDKL5-206ENST00000623610 KRT77Q7Z794 578 aa10.46□□□□□ -0.74
CDKL5-206ENST00000623610 USP48Q86UV5 1035 aa10.46□□□□□ -0.74
CDKL5-206ENST00000623610 SLC43A3Q8NBI5 491 aa10.46□□□□□ -0.74
CDKL5-206ENST00000623610 ACRBPQ8NEB7 543 aa10.46□□□□□ -0.74
CDKL5-206ENST00000623610 CENPJQ9HC77 1338 aaPredicted RBP10.46□□□□□ -0.74
CDKL5-206ENST00000623610 MTA2O94776 668 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 RBP3P10745 1247 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 ARMC3Q5W041 872 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 APBA2Q99767 749 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
CDKL5-206ENST00000623610 HDAC9Q9UKV0 1011 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 ADAMTSL3P82987 1691 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 TAF3Q5VWG9 929 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 CHCHD4Q8N4Q1 142 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 KIAA1958Q8N8K9 716 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 LSM14AQ8ND56 463 aaKnown RBP10.45□□□□□ -0.74
CDKL5-206ENST00000623610 ZMIZ1Q9ULJ6 1067 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
CDKL5-206ENST00000623610 GJA3Q9Y6H8 435 aa10.45□□□□□ -0.74
CDKL5-206ENST00000623610 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 PRSS47A8MTI9 375 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
CDKL5-206ENST00000623610 TBX3O15119 743 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 CLK1P49759 484 aaKnown RBP10.44□□□□□ -0.74
CDKL5-206ENST00000623610 ZC3H12AQ5D1E8 599 aaKnown RBP10.44□□□□□ -0.74
CDKL5-206ENST00000623610 CCDC89Q8N998 374 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 PPCSQ9HAB8 311 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 NLRP2Q9NX02 1062 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 FAM13BQ9NYF5 915 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
CDKL5-206ENST00000623610 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 SATB1Q01826 763 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 RAPGEF1Q13905 1077 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 E2F5Q15329 346 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 TOMM20Q15388 145 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 ERP27Q96DN0 273 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 PCDHB13Q9Y5F0 798 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 CCDC61Q9Y6R9 512 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 REREQ9P2R6 1566 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 BPNT1O95861 308 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 GJC2Q5T442 439 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-206ENST00000623610 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 RANBP17Q9H2T7 1088 aaKnown RBP10.43□□□□□ -0.74
CDKL5-206ENST00000623610 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 RTEL1-TNFRSF6BF6WH68 1400 aa10.43□□□□□ -0.74
CDKL5-206ENST00000623610 TMEM238LA0A1B0GVL6 79 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 PLIN1O60240 522 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 BRD3Q15059 726 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 FERMT3Q86UX7 667 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
CDKL5-206ENST00000623610 WASHC5Q12768 1159 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 CCSER2Q9H7U1 834 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 YY1AP1Q9H869 796 aa10.42□□□□□ -0.74
CDKL5-206ENST00000623610 A2MP01023 1474 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 SETD1BQ9UPS6 1966 aaKnown RBP10.41□□□□□ -0.74
CDKL5-206ENST00000623610 TRAPPC10P48553 1259 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 VPS72Q15906 364 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 PDXDC1Q6P996 788 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 ABCC5O15440 1437 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 RIMS1Q86UR5 1692 aaKnown RBP10.41□□□□□ -0.74
CDKL5-206ENST00000623610 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
CDKL5-206ENST00000623610 PLXNC1O60486 1568 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
CDKL5-206ENST00000623610 SRGNP10124 158 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 PTPRMP28827 1452 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 AGLP35573 1532 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 HMGN5P82970 282 aaKnown RBP10.4□□□□□ -0.74
CDKL5-206ENST00000623610 ZBED6P86452 979 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDKL5-206ENST00000623610 RELL1Q8IUW5 271 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 SAMD3Q8N6K7 520 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 ITFG2Q969R8 447 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 FER1L4A9Z1Z3 1794 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms