RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 HDGFL1Q5TGJ6 251 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 DUSP27Q5VZP5 1158 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
COL8A1-208ENST00000621757 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 NUP98P52948 1817 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 IL16Q14005 1332 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 SERPINB2P05120 415 aa15.62■□□□□ 0.09
COL8A1-208ENST00000621757 KIF6Q6ZMV9 814 aa15.62■□□□□ 0.09
COL8A1-208ENST00000621757 TTLL7Q6ZT98 887 aa15.62■□□□□ 0.09
COL8A1-208ENST00000621757 MAP3K15Q6ZN16 1313 aa15.62■□□□□ 0.09
COL8A1-208ENST00000621757 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 RGL2O15211 777 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 HLFQ16534 295 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 CLEC4GQ6UXB4 293 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 WWC3Q9ULE0 1092 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 DLEC1Q9Y238 1755 aa15.61■□□□□ 0.09
COL8A1-208ENST00000621757 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
COL8A1-208ENST00000621757 TGFB2P61812 414 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 ZBTB3Q9H5J0 574 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
COL8A1-208ENST00000621757 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
COL8A1-208ENST00000621757 ANKRD36CQ5JPF3 1778 aa15.59■□□□□ 0.09
COL8A1-208ENST00000621757 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
COL8A1-208ENST00000621757 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
COL8A1-208ENST00000621757 DPEP1P16444 411 aa15.59■□□□□ 0.09
COL8A1-208ENST00000621757 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
COL8A1-208ENST00000621757 DDX21Q9NR30 783 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL8A1-208ENST00000621757 CHD4Q14839 1912 aa15.58■□□□□ 0.09
COL8A1-208ENST00000621757 PRR5LQ6MZQ0 368 aa15.58■□□□□ 0.08
COL8A1-208ENST00000621757 MIER1Q8N108 512 aa15.58■□□□□ 0.08
COL8A1-208ENST00000621757 TSPYL6Q8N831 410 aa15.58■□□□□ 0.08
COL8A1-208ENST00000621757 CNBD1Q8NA66 436 aa15.58■□□□□ 0.08
COL8A1-208ENST00000621757 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
COL8A1-208ENST00000621757 NIP7Q9Y221 180 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL8A1-208ENST00000621757 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
COL8A1-208ENST00000621757 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
COL8A1-208ENST00000621757 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
COL8A1-208ENST00000621757 ZNF521Q96K83 1311 aa15.57■□□□□ 0.08
COL8A1-208ENST00000621757 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
COL8A1-208ENST00000621757 NPHP1O15259 732 aa15.56■□□□□ 0.08
COL8A1-208ENST00000621757 GRIN3BO60391 1043 aa15.56■□□□□ 0.08
COL8A1-208ENST00000621757 CHRNA5P30532 468 aa15.56■□□□□ 0.08
COL8A1-208ENST00000621757 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
COL8A1-208ENST00000621757 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
COL8A1-208ENST00000621757 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
COL8A1-208ENST00000621757 ARFGEF1Q9Y6D6 1849 aa15.55■□□□□ 0.08
COL8A1-208ENST00000621757 TNRC6CQ9HCJ0 1690 aaKnown RBP15.55■□□□□ 0.08
COL8A1-208ENST00000621757 UBN2Q6ZU65 1347 aa15.55■□□□□ 0.08
COL8A1-208ENST00000621757 KCNA3P22001 575 aa15.55■□□□□ 0.08
COL8A1-208ENST00000621757 ST5P78524 1137 aa15.55■□□□□ 0.08
COL8A1-208ENST00000621757 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
COL8A1-208ENST00000621757 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
COL8A1-208ENST00000621757 GPTP24298 496 aa15.54■□□□□ 0.08
COL8A1-208ENST00000621757 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
COL8A1-208ENST00000621757 HYPKQ9NX55 129 aa15.54■□□□□ 0.08
COL8A1-208ENST00000621757 ABCC12Q96J65 1359 aa15.53■□□□□ 0.08
COL8A1-208ENST00000621757 IBTKQ9P2D0 1353 aaPredicted RBP15.53■□□□□ 0.08
COL8A1-208ENST00000621757 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
COL8A1-208ENST00000621757 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
COL8A1-208ENST00000621757 BCS1LQ9Y276 419 aa15.53■□□□□ 0.08
COL8A1-208ENST00000621757 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
COL8A1-208ENST00000621757 C2CD5Q86YS7 1000 aa15.52■□□□□ 0.08
COL8A1-208ENST00000621757 ZNF34Q8IZ26 560 aa15.52■□□□□ 0.08
COL8A1-208ENST00000621757 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
COL8A1-208ENST00000621757 PIM2Q9P1W9 311 aa15.52■□□□□ 0.08
COL8A1-208ENST00000621757 CACNA1SQ13698 1873 aa15.51■□□□□ 0.07
COL8A1-208ENST00000621757 PDE6BP35913 854 aa15.51■□□□□ 0.07
COL8A1-208ENST00000621757 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
COL8A1-208ENST00000621757 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
COL8A1-208ENST00000621757 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
COL8A1-208ENST00000621757 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
COL8A1-208ENST00000621757 H0YIN7 160 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
COL8A1-208ENST00000621757 NTSR2O95665 410 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
COL8A1-208ENST00000621757 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 NYXQ9GZU5 481 aa15.5■□□□□ 0.07
COL8A1-208ENST00000621757 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
COL8A1-208ENST00000621757 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
COL8A1-208ENST00000621757 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
COL8A1-208ENST00000621757 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
COL8A1-208ENST00000621757 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
COL8A1-208ENST00000621757 TCIRG1Q13488 830 aa15.48■□□□□ 0.07
COL8A1-208ENST00000621757 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
COL8A1-208ENST00000621757 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
COL8A1-208ENST00000621757 ADCY9O60503 1353 aa15.48■□□□□ 0.07
COL8A1-208ENST00000621757 CACNA1FO60840 1977 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 VAMP4O75379 141 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 SRGNP10124 158 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms