RNA–Protein interactions for RNA: ENST00000619172.4

LINC01660-204, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5 BASIC

Gene LINC01660, Length 3,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-204ENST00000619172 ZNF771Q7L3S4 317 aaPredicted RBP11.23□□□□□ -0.61
LINC01660-204ENST00000619172 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
LINC01660-204ENST00000619172 TET3O43151 1660 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 IQSEC2Q5JU85 1478 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 PRAMEF22A3QJZ6 481 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 LARGE1O95461 756 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC01660-204ENST00000619172 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
LINC01660-204ENST00000619172 MYD88Q99836 296 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 ZFYVE9O95405 1425 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 PTGS1P23219 599 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 UBE2HP62256 183 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
LINC01660-204ENST00000619172 CEP152O94986 1710 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 BIN1O00499 593 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 CCDC129Q6ZRS4 1044 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 EFCAB6Q5THR3 1501 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 FAM135BQ49AJ0 1406 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 LRRC7Q96NW7 1537 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 CPLX1O14810 134 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 PSMA5P28066 241 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 HAND2P61296 217 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 NMIQ13287 307 aaPredicted RBP11.22□□□□□ -0.61
LINC01660-204ENST00000619172 CCDC73Q6ZRK6 1079 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
LINC01660-204ENST00000619172 LTKP29376 864 aa11.21□□□□□ -0.61
LINC01660-204ENST00000619172 DDIT3P35638 169 aa11.21□□□□□ -0.61
LINC01660-204ENST00000619172 HSP90AA4PQ58FG1 418 aa11.21□□□□□ -0.61
LINC01660-204ENST00000619172 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
LINC01660-204ENST00000619172 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
LINC01660-204ENST00000619172 SMC2O95347 1197 aa11.21□□□□□ -0.62
LINC01660-204ENST00000619172 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.62
LINC01660-204ENST00000619172 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.62
LINC01660-204ENST00000619172 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.62
LINC01660-204ENST00000619172 HTATSF1O43719 755 aaKnown RBP11.21□□□□□ -0.62
LINC01660-204ENST00000619172 RUFY3Q7L099 469 aa11.21□□□□□ -0.62
LINC01660-204ENST00000619172 BRF1Q92994 677 aa11.21□□□□□ -0.62
LINC01660-204ENST00000619172 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 SGSM2O43147 1006 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 ZNF165P49910 485 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 LRMPQ12912 555 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
LINC01660-204ENST00000619172 GLI2P10070 1586 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 LAMC1P11047 1609 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 KINO60870 393 aaKnown RBP11.2□□□□□ -0.62
LINC01660-204ENST00000619172 PDCP20941 246 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
LINC01660-204ENST00000619172 JAK2O60674 1132 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
LINC01660-204ENST00000619172 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
LINC01660-204ENST00000619172 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 DBF4Q9UBU7 674 aaPredicted RBP11.19□□□□□ -0.62
LINC01660-204ENST00000619172 ZMYM3Q14202 1370 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 KCNA6P17658 529 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 HOXC9P31274 260 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 ME3Q16798 604 aa11.19□□□□□ -0.62
LINC01660-204ENST00000619172 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
LINC01660-204ENST00000619172 HSPA4P34932 840 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 HDAC5Q9UQL6 1122 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 MYOM1P52179 1685 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 GOLIM4O00461 696 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 LIG1P18858 919 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 ANAPC15P60006 121 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 BICC1Q9H694 974 aaKnown RBP11.18□□□□□ -0.62
LINC01660-204ENST00000619172 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
LINC01660-204ENST00000619172 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
LINC01660-204ENST00000619172 PPRC1Q5VV67 1664 aaKnown RBP11.18□□□□□ -0.62
LINC01660-204ENST00000619172 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
LINC01660-204ENST00000619172 SEC62Q99442 399 aaKnown RBP11.18□□□□□ -0.62
LINC01660-204ENST00000619172 NRDCO43847 1150 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 LETM1O95202 739 aaPredicted RBP11.17□□□□□ -0.62
LINC01660-204ENST00000619172 CHGBP05060 677 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 CHRNA2Q15822 529 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 INTS4Q96HW7 963 aaKnown RBP11.17□□□□□ -0.62
LINC01660-204ENST00000619172 MAP7D2Q96T17 732 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 TNNT1P13805 278 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 CCDC112Q8NEF3 446 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 NCOA5Q9HCD5 579 aaKnown RBP11.17□□□□□ -0.62
LINC01660-204ENST00000619172 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 RAD50Q92878 1312 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 TYRO3Q06418 890 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 NRBP1Q9UHY1 535 aa11.17□□□□□ -0.62
LINC01660-204ENST00000619172 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms