RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 PYCARDQ9ULZ3 195 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 PRPF40BQ6NWY9 871 aaKnown RBP18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 SLC26A8Q96RN1 970 aa18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 ATP6V1DQ9Y5K8 247 aa18.11■□□□□ 0.49
PCDHGB1-202ENST00000611598 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 LTKP29376 864 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 COL9A3Q14050 684 aaPredicted RBP18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 SMAP1Q8IYB5 467 aaPredicted RBP18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 NECAB1Q8N987 351 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 DIAPH3Q9NSV4 1193 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
PCDHGB1-202ENST00000611598 ANXA1P04083 346 aa18.09■□□□□ 0.49
PCDHGB1-202ENST00000611598 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
PCDHGB1-202ENST00000611598 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
PCDHGB1-202ENST00000611598 KIAA1524Q8TCG1 905 aa18.09■□□□□ 0.49
PCDHGB1-202ENST00000611598 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
PCDHGB1-202ENST00000611598 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 HOXC9P31274 260 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 ME3Q16798 604 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 NWD1Q149M9 1564 aa18.08■□□□□ 0.49
PCDHGB1-202ENST00000611598 TNRQ92752 1358 aa18.08■□□□□ 0.48
PCDHGB1-202ENST00000611598 NLRP6P59044 892 aa18.08■□□□□ 0.48
PCDHGB1-202ENST00000611598 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.48
PCDHGB1-202ENST00000611598 BEND3Q5T5X7 828 aa18.08■□□□□ 0.48
PCDHGB1-202ENST00000611598 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 KIF3AQ9Y496 699 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 CRYBG1Q9Y4K1 1723 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 BCL2L12Q9HB09 334 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 ZSWIM6Q9HCJ5 1215 aa18.07■□□□□ 0.48
PCDHGB1-202ENST00000611598 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 FERMT3Q86UX7 667 aa18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 DNAAF4Q8WXU2 420 aa18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
PCDHGB1-202ENST00000611598 CAMK4Q16566 473 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 TPCN1Q9ULQ1 816 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 TTC41PQ6P2S7 1318 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 KCNQ3O43525 872 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 LIG1P18858 919 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 CDC37L1Q7L3B6 337 aa18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 PA2G4Q9UQ80 394 aaKnown RBP18.05■□□□□ 0.48
PCDHGB1-202ENST00000611598 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 UBR1Q8IWV7 1749 aa18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 RUFY2Q8WXA3 655 aa18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
PCDHGB1-202ENST00000611598 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 LUZP1Q86V48 1076 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 ZSCAN31Q96LW9 406 aaPredicted RBP18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 PTGS1P23219 599 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 CBX1P83916 185 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 ATP2B3Q16720 1220 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 CLASRPQ8N2M8 674 aaKnown RBP18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 FAM227BQ96M60 508 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 ADCY9O60503 1353 aa18.03■□□□□ 0.48
PCDHGB1-202ENST00000611598 CCDC171Q6TFL3 1326 aa18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 KCNB2Q92953 911 aa18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 AMOTL2Q9Y2J4 779 aa18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 MRVI1Q9Y6F6 885 aa18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.02■□□□□ 0.48
PCDHGB1-202ENST00000611598 CREB3L3Q68CJ9 461 aa18.02■□□□□ 0.47
PCDHGB1-202ENST00000611598 CKAP2LQ8IYA6 745 aa18.02■□□□□ 0.47
PCDHGB1-202ENST00000611598 ZSCAN20P17040 1043 aaPredicted RBP18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 TYRO3Q06418 890 aa18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 FAM200AQ8TCP9 573 aa18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 NUP62CLQ9H1M0 184 aa18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
PCDHGB1-202ENST00000611598 KRT85P78386 507 aa18■□□□□ 0.47
PCDHGB1-202ENST00000611598 MAP3K11Q16584 847 aa18■□□□□ 0.47
PCDHGB1-202ENST00000611598 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
PCDHGB1-202ENST00000611598 CEMIPQ8WUJ3 1361 aa18■□□□□ 0.47
PCDHGB1-202ENST00000611598 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 KCNJ4P48050 445 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms