RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 KIF3AQ9Y496 699 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 CASQ1P31415 396 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 SMC5Q8IY18 1101 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 KLF15Q9UIH9 416 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 CAMSAP2Q08AD1 1489 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 LRRC9Q6ZRR7 1453 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 SETSIPP0DME0 302 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 PLEKHG6Q3KR16 790 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 LMBRD2Q68DH5 695 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-207ENST00000604689 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 TAX1BP1Q86VP1 789 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 C1orf131Q8NDD1 294 aaKnown RBP8.52□□□□□ -1.05
TUBE1-207ENST00000604689 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.05
TUBE1-207ENST00000604689 RSPH14Q9UHP6 348 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-207ENST00000604689 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 FER1L4A9Z1Z3 1794 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 PREX2Q70Z35 1606 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
TUBE1-207ENST00000604689 KDM5CP41229 1560 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 SPDYE16A6NNV3 312 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-207ENST00000604689 PHC3Q8NDX5 983 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 MAF1Q9H063 256 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 PRM3Q9NNZ6 103 aa8.51□□□□□ -1.05
TUBE1-207ENST00000604689 MOXD2PA6NHM9 499 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 ESPNB1AK53 854 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 DUSP27Q5VZP5 1158 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 MNS1Q8NEH6 495 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 MKNK1Q9BUB5 465 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 PLXNC1O60486 1568 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 BORCS6Q96GS4 357 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 CEP89Q96ST8 783 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 RABL2AQ9UBK7 228 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-207ENST00000604689 SUFUQ9UMX1 484 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 HMGB1P1B2RPK0 211 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-207ENST00000604689 IPO5O00410 1097 aaKnown RBP8.5□□□□□ -1.05
TUBE1-207ENST00000604689 RRM1P23921 792 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 CBLBQ13191 982 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 NEUROD6Q96NK8 337 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 GPHNQ9NQX3 736 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-207ENST00000604689 BSDC1Q9NW68 430 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-207ENST00000604689 NCOA1Q15788 1441 aa8.5□□□□□ -1.05
TUBE1-207ENST00000604689 ERCC6Q03468 1493 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 PSMD2Q13200 908 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
TUBE1-207ENST00000604689 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 ARPC5LQ9BPX5 153 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 CCSER2Q9H7U1 834 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 MAP3K20Q9NYL2 800 aaKnown RBP8.49□□□□□ -1.05
TUBE1-207ENST00000604689 ABCC2Q92887 1545 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 PRMT3O60678 531 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 XBP1P17861 261 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 TAF4BQ92750 862 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
TUBE1-207ENST00000604689 PICK1Q9NRD5 415 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
TUBE1-207ENST00000604689 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 ATP2B4P23634 1241 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 CCDC47Q96A33 483 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 FAM210AQ96ND0 272 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 FBXO9Q9UK97 447 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 TIAM1Q13009 1591 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 ZC3H13Q5T200 1668 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 PAF1Q8N7H5 531 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 CHCHD3Q9NX63 227 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 MAGEC2Q9UBF1 373 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 SCAMP3O14828 347 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 APLP1P51693 650 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 C1QTNF12Q5T7M4 302 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 METTL16Q86W50 562 aaKnown RBP8.48□□□□□ -1.05
TUBE1-207ENST00000604689 TMC2Q8TDI7 906 aa8.48□□□□□ -1.05
TUBE1-207ENST00000604689 RNF17Q9BXT8 1623 aaKnown RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 UQCRHLA0A096LP55 91 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 UQCRHP07919 91 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 CHAF1AQ13111 956 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 FEZ2Q9UHY8 353 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 DHX29Q7Z478 1369 aaKnown RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 CTAGE5O15320 804 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 BDNFP23560 247 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 DEF6Q9H4E7 631 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 MSNP26038 577 aaKnown RBP8.47□□□□□ -1.05
TUBE1-207ENST00000604689 MAP2K2P36507 400 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 FLT3P36888 993 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms